| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1800 |
|---|
| Symbol | |
|---|
| ID | 4076946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 1891610 |
|---|
| End bp | 1892491 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638007115 |
|---|
| Product | GCN5-related N-acetyltransferase |
|---|
| Protein accession | YP_613795 |
|---|
| Protein GI | 99081641 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00968802 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0222473 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGAGC CCTGTCAGCC GGAGGCCGCC ATGCAGCAGA GCTTTGAGAT CCGCCCGCTC
ACGCGCGATG AAATCGATGT GGCCGTGACC TGGGCCGCGC ATGAAGGCTG GAACCCCGGC
CCAAGCGATG CGACCTGTTT TGCGGCACAG GATGAACGCG GGTTCTGGGG CGGCTTTCTT
GAGGGCGAGA TGATCGCCTG CATTTCTGTT GTGACCTATG GCGCGGCCTT TGCCTTTTTG
GGGTTTTACA TTGTGGCGCC TCAGCACCGG GGGCAGGGCT ATGGGTATGC GCTCTGGCAA
CGCGCCCTTG AGCATGCGGG CCAGCGCAGC GTTGGCCTCG ATGGGGTGGT GGACCAGCAG
GAAAACTACC GCCGCTCCGG CTTTGATCTG GCGTGGAGCA ACATTCGTTT CGGCGGCGTG
CTGGACGCGG TGCCGCGGGC TTCTGACGCC TTCAGCCTGA CGTGGCTGGA CGGGCTGACG
CAGGATGTGG CGGCGTTTGA CGCGCGCGTG TTTCCAGCAC CGCGCCCGGC CTTCTGGCAG
CACTGGCTGA GGGCGCCGGG ACATGTGAGC ATCGCGGCCT ATGACGAGAC CGGGATCAGC
GGCTTTGGCA CCCTGCGGCG CTGCGAGACC GGCGCCAAGA TCGCGCCTCT CGTGGCAACC
TCGCGGGAGG CGGCACAAGC TGTGCTGGCA GGGCTGCTCC GGGACTGGCC CAAAGACGAA
GAGGTCTTTC TTGATGTGCC AGAACCGAAT GCGGCAGCGG TGGCCCTGGC ACGCGATCTC
GGTCTGGTGC CCGTGTTTGA AACCGCGCGC ATGTACCGGG GACGTCGCCC CGAAGTTGCG
CGGGATCTTA TCTATGGCGT GACAAGCTTC GAGTTGGGCT GA
|
|---|
| Protein sequence | MLEPCQPEAA MQQSFEIRPL TRDEIDVAVT WAAHEGWNPG PSDATCFAAQ DERGFWGGFL
EGEMIACISV VTYGAAFAFL GFYIVAPQHR GQGYGYALWQ RALEHAGQRS VGLDGVVDQQ
ENYRRSGFDL AWSNIRFGGV LDAVPRASDA FSLTWLDGLT QDVAAFDARV FPAPRPAFWQ
HWLRAPGHVS IAAYDETGIS GFGTLRRCET GAKIAPLVAT SREAAQAVLA GLLRDWPKDE
EVFLDVPEPN AAAVALARDL GLVPVFETAR MYRGRRPEVA RDLIYGVTSF ELG
|
|---|
| |