| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1790 |
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| Symbol | |
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| ID | 4076819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1883789 |
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| End bp | 1884436 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638007105 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_613785 |
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| Protein GI | 99081631 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0331104 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATA AAATCGCCCT TATCACCGGG GCCTCGCGCG GCCTCGGTGC CGCCCTGGCA
GAGGCGCTTG CGCCCACCCA CCACATCATC GCCGTCGCCC GCACCACGGG CGCGCTCGAA
GAGCTGGACG ACCGCATCCA GGCCGCAGGC GGTTCCGCGA CGCTGGCCCC CATGGACATC
ACGGTCCCCG AGGCGATGGC CACCCTCTGC CGTGGCATCT TTGACCGCTG GGGCAAGCTG
GATCTGTGGC TCCATACCGC AATCCATGCC GCCCCCCTCA GCCCGGCTCA CCATGTGGCG
CCAAAGGACT GGCAGAAATC CGTCAGCGTC AACGCCACCG CGCCTTCGGT GCTGGTACCC
TATGTGGCGC CGCTTCTTGG ACAGGACGGC ACGGCGGTGT TCTTCGACGA CCCGCGCGCG
GGCGAGAAGT TCTTCGGCGC GTATGGCGCC ACCAAAGCCG CCCAGATCGC CTTGGTGCGC
AGCTGGCAGC AGGAAACCAT CCGCACCGGC CCGCATGTCA AACTGCTGAC ACCCCCGGCC
ATGCCGACGG CCCTGCGCGC CCGCTTCTTC CCCGGCGAGG ATCGCACGCC TCTGACGCCT
CCGGCGGAGG CTGCAAAGGC GCTTCTGACT GACATCCTCG CCCCCTGA
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| Protein sequence | MTDKIALITG ASRGLGAALA EALAPTHHII AVARTTGALE ELDDRIQAAG GSATLAPMDI
TVPEAMATLC RGIFDRWGKL DLWLHTAIHA APLSPAHHVA PKDWQKSVSV NATAPSVLVP
YVAPLLGQDG TAVFFDDPRA GEKFFGAYGA TKAAQIALVR SWQQETIRTG PHVKLLTPPA
MPTALRARFF PGEDRTPLTP PAEAAKALLT DILAP
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