| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1784 |
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| Symbol | |
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| ID | 4076813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1877394 |
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| End bp | 1878758 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638007099 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_613779 |
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| Protein GI | 99081625 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.199022 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGA CAACATTCTC CTGCTCCGCC TGCGGGGCCT CCTATTCCAA ATGGTCCGGT
CGCTGCGAGG GCTGCGGTGA GTGGAATACG ATTTCCGAAG ACAAGGGGCT GAGCTCTGGA
GGACCGGCCA AGAAGTCCCT TGGCGCAATG CGCGGCAAAC GACTGGCGCT GAGCGATCTG
GCCACGCAAG AGACGCCTCC TCCGCGCACC CTTTGTGGTG TGGCAGAGCT TGATCGCGTC
CTTGGAGGCG GCCTGGTCGA TGCGTCGGCC ATCCTCGTGG GGGGCGATCC CGGGATCGGT
AAATCCACGC TGCTGTTGCA AGCTGCGGCG CAATTTGCAC ACGCAGGCCT GAAGACGGTC
TATGTTTCGG GAGAGGAAGC CTCGGCGCAG GTACGGATGC GCGCCCAGCG TCTGGGACTG
GCACAAGCCC CTGTCAAGCT CGCGGCGGAA ACCAACCTGC GCGATATTCT CACCACGCTT
GAGGCGGAAA AACCCCAGCT GGCCATTATC GATTCGATCC AGACCATGTG GGCCGACAAT
GTGGACAGTG CGCCGGGATC CGTCAGTCAG GTGCGCGCGG CGGCCCATGA GCTGACCACT
TTTGCCAAGA CCAATGGTGT CAGCATCATC ATGGTGGGCC ATGTCACCAA GGAAGGCCAG
ATCGCCGGGC CTCGCGTGGT CGAACATATG GTCGACACGG TCTTGTATTT CGAGGGCGAG
CGCGGCCACC AGTTCCGCAT CCTGCGTGCC GTGAAGAACC GCTTTGGCCC TGCCGACGAG
ATTGGCGTCT TTGAGATGAC CGGCGGCGGG CTGGCGCAAG TGGTGAACCC TTCGGCCCTG
TTTCTGTCCG AACGCGGCCA GCCCTCGCCC GGATCGGTGG TCTTTGCCGG TATCGAAGGC
ACCCGTCCGG TCCTCGTGGA AATGCAGGCG CTGGTGGCGC CTTCGCCCCA TTCGCAGCCC
CGCCGCGCTG TGGTGGGCTG GGACAGCTCG CGCCTTGCGA TGATCCTCGC CGTTCTGGAG
GCGCGCTGTG GCATTCCTTT TGCCGGGCTT GATGTCTATC TCAATGTTGC GGGCGGCATG
AAAATCTCTG AACCCGCGGC CGACCTGGCG GTGGCGGCCG CCCTCCTTAG TGCACGCGAG
GACACCGCCC TGCCCGCCGA TACGGCAATA TTTGGCGAAA TATCCCTATC TGGCGCGCTC
AGACCGGCCC CTCAGACCGA AAACCGGTTG AAAGAGGCGC AAAAACTTGG TTTCACGGCA
GCGATCGCTC CGAGCGGTGG CAAAACTGTT TCTGTCCCCG GCCTGACCCT GCGCCCGGCC
GCCGACCTCA CAGGATTTGT TGGCGAATAT TTCGGAGCAG GCTAA
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| Protein sequence | MAKTTFSCSA CGASYSKWSG RCEGCGEWNT ISEDKGLSSG GPAKKSLGAM RGKRLALSDL
ATQETPPPRT LCGVAELDRV LGGGLVDASA ILVGGDPGIG KSTLLLQAAA QFAHAGLKTV
YVSGEEASAQ VRMRAQRLGL AQAPVKLAAE TNLRDILTTL EAEKPQLAII DSIQTMWADN
VDSAPGSVSQ VRAAAHELTT FAKTNGVSII MVGHVTKEGQ IAGPRVVEHM VDTVLYFEGE
RGHQFRILRA VKNRFGPADE IGVFEMTGGG LAQVVNPSAL FLSERGQPSP GSVVFAGIEG
TRPVLVEMQA LVAPSPHSQP RRAVVGWDSS RLAMILAVLE ARCGIPFAGL DVYLNVAGGM
KISEPAADLA VAAALLSARE DTALPADTAI FGEISLSGAL RPAPQTENRL KEAQKLGFTA
AIAPSGGKTV SVPGLTLRPA ADLTGFVGEY FGAG
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