| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1779 |
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| Symbol | |
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| ID | 4076808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1873275 |
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| End bp | 1874312 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638007094 |
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| Product | alanine racemase |
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| Protein accession | YP_613774 |
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| Protein GI | 99081620 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0787] Alanine racemase |
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| TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.155065 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.202897 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACGG CACGTTTAAA AATCAATCTG GATGCGCTGG CGATCAACTG GCGCAATCTG
GATGCCAAGA CCAACTGCGA GACCGCAGCG GTGGTCAAGG CCAATGGCTA TGGTCTGGAA
TCCGGCCGCG TCGGCAAGGC GCTGGCACAG GCAGGCGCGC GCAATTTCTT TGTCGCCATC
GCCGAAGAAG GCATTGCGCT CAGGCGCGCG CTTGGACCCG GCCCGGGTAT TTCGGTCTTT
GCAGGTCATA TGGAGGGCGA CGCAAAACTC CTGCGTGACT TCCAGCTGAC GCCGATGCTC
AACTCGCTGG ATCAGATGCT GCGCCATTTC GAGAGCCTGC CGGGCCACCC CTTTGGCGTC
CAGCTCGACA GCGGCATGAA CCGGCTTGGC ATGGAGGCCG CCGAATGGAT GGCCGTGCGC
GACATCGCCC TCGATCAAAA CCCCGTCCTC TTGATGTCGC ATCTGGCCTG CTCGGACGAG
CCGGGCCACG GCATGAACGC ATATCAGCTC AAGAATTTCA TCGAGATGAC CGAGGGGCTC
AATATCCCCC GCTCGCTCGC GGCCACTGGC GGCCTTCTGC TGGGGCGCGA CTACCACTTT
GATCTCTGCC GTCCCGGCAT CGGGCTTTAT GGGGGCGCAC CCTACGCCGA TGCGCTGCCC
GTGGTCGAGC TTGAGGTGCC GGTGATTCAG GTGCGCGACC TCGCCCCGGG CGAGAGCGTC
GGCTACGGCA ACACCTGGAT TGCGCAGCGC GACAGCAAGA TCGCCACCAT TGCCGGCGGC
TATGCCGACG GGCTGCACCG GGCGTTCCAG CGACAGGGGA TCATGGCTTA TGCGGGCGGC
ACCCCCTGCC CCGTGGTGGG TCGGATCTCG ATGGATCTCA TCACCGTCGA TGTCACCGAC
CTGGCCGAAG TGCCGCCCTA CCTGAGCCTC ATGAATGAGA CGCAGACCGT GGATGTGCTG
GCAAACGCCG CTGATACCAT CGGCTATGAG GTCCTGACCT CGCTCGGCAA CCGCTATGCG
AGGACCTACA GCGCATGA
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| Protein sequence | MSTARLKINL DALAINWRNL DAKTNCETAA VVKANGYGLE SGRVGKALAQ AGARNFFVAI
AEEGIALRRA LGPGPGISVF AGHMEGDAKL LRDFQLTPML NSLDQMLRHF ESLPGHPFGV
QLDSGMNRLG MEAAEWMAVR DIALDQNPVL LMSHLACSDE PGHGMNAYQL KNFIEMTEGL
NIPRSLAATG GLLLGRDYHF DLCRPGIGLY GGAPYADALP VVELEVPVIQ VRDLAPGESV
GYGNTWIAQR DSKIATIAGG YADGLHRAFQ RQGIMAYAGG TPCPVVGRIS MDLITVDVTD
LAEVPPYLSL MNETQTVDVL ANAADTIGYE VLTSLGNRYA RTYSA
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