Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1776 |
Symbol | |
ID | 4076805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1869523 |
End bp | 1870563 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638007091 |
Product | dihydroorotase |
Protein accession | YP_613771 |
Protein GI | 99081617 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0418] Dihydroorotase |
TIGRFAM ID | [TIGR00856] dihydroorotase, homodimeric type |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.130496 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.212063 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGA GCCTGACGAT CACCCGCCCC GACGACTGGC ATCTGCATCT GCGCGACGGC GACATGCTGC GCGCGGTGCT GCCGGAAACA GCCCGCCATT TTGGCCGCGC CATCATCATG CCCAATCTCG TGCCCCCGGT TGTCACCGGC GCCGAGGCCA GCGCCTATCG CGACCGCATT CTTGCCGCAC TCCCTGAGGG CATGACGTTC GAGCCCCTGA TGACGCTCTA TCTCACCGAG GACACGGACC CTGCAGATGT CGCAGCCGCC CATGCCTCGG GTCTGGTCAA AGCCGTCAAG CTCTACCCCG CTGGCGCCAC CACCAACTCC TCGTCCGGTG TGCGCGATTT CGACAAGGTC CGCCCCGTGC TTGAGAAAAT GGCCGAAATC GGCCTGCCGC TCTGCACCCA TGGCGAGGTC ACCGACCACG ACATCGACAT CTTTGACCGC GAGGCCGTCT TTATCGATCG CGTGCTGGAC CCGATCCGCC AATCCACACC GGGCCTGCGT GTGGTGATGG AGCATATCAC CACCAAGGAC GCGGCGGATT ATGTGCGATC GCAGGACAAG GATCTTGGCG CGACAATCAC CACGCACCAC CTGATCATCA ATCGCAACCA CATCCTCGTG GGCGGGATCA AGCCACACTA TTACTGCCTG CCTGTCGCCA AGCGCGAAGA GCACCGCCTC GCCCTGCGCC AAGCTGCGAC CTCCGGTGAT GCGCGGTTCT TCCTTGGTAC CGACTCAGCG CCCCACACCG ATGCCAACAA GCTCCAGACC TGTGGCTGCG CGGGTTGTTT CACGGCGACC AACACCATGG CTCTGCTGGC CCATGTATTT GAGGAAGAAG GCGCGCTCGA CAAGCTCGAA GGGTTTGCCT CCAAGAACGG CCCCGCCTTT TATCGCTTAC CCGAAAACGA TGGTCAGATC ACACTGGTGA AACAGGACGC GCCCGTCGCT TTCCCGGAAC AGATCGACAC GCCGGACGGC CCCGTGACCG TCTTTGATCC AAGCTTTGCG GTGCATTGGA CCGTCACCTG A
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Protein sequence | MTQSLTITRP DDWHLHLRDG DMLRAVLPET ARHFGRAIIM PNLVPPVVTG AEASAYRDRI LAALPEGMTF EPLMTLYLTE DTDPADVAAA HASGLVKAVK LYPAGATTNS SSGVRDFDKV RPVLEKMAEI GLPLCTHGEV TDHDIDIFDR EAVFIDRVLD PIRQSTPGLR VVMEHITTKD AADYVRSQDK DLGATITTHH LIINRNHILV GGIKPHYYCL PVAKREEHRL ALRQAATSGD ARFFLGTDSA PHTDANKLQT CGCAGCFTAT NTMALLAHVF EEEGALDKLE GFASKNGPAF YRLPENDGQI TLVKQDAPVA FPEQIDTPDG PVTVFDPSFA VHWTVT
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