| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1765 |
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| Symbol | |
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| ID | 4076794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1855343 |
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| End bp | 1857721 |
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| Gene Length | 2379 bp |
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| Protein Length | 792 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638007080 |
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| Product | xanthine dehydrogenase, molybdenum binding subunit apoprotein |
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| Protein accession | YP_613760 |
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| Protein GI | 99081606 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
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| TIGRFAM ID | [TIGR02416] carbon-monoxide dehydrogenase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAAGG ATATTGAAGC CAAGGAAAGC GGCATAGGGG CCGCCACCAA ACGGCGCGAA
GACGTAAGGT TCCTGACGGG AACCGGGAAT TATGCTGACG ACATCAATGT AAACGGTCAG
GCCTATGTGC ATTTCCTGCG CTCGGATGTG GCGCATGGGC GGATCACCTC GCTTGAGACT
GCCGCAGCGG CGGCGATGCC GGGCGTGCTG CGGGTGTTCA CCGGGGCAGA TTTCGAAGGC
GTCGGAGGAC TGCCCTGCGG CTGGCAGGTG ACGGATCGCT TTGGTGAGGT GATGCAGGAA
CCTGCCCACC CGGTGCTGGC GCAGGGCAAG GTGCGCCATG TGGGTGATCC GATCGCCGCG
GTGGTGGCCG AGAGCGCCGA ATTGGCTCGC GATGCCGCCG AGGCGATCGA ACTGGAGATC
GAAGAGCTTC CGGCAGTGAT CGACATGAAG GCCGCTCTTG CTGAGGAGGC CCCGAAGGTA
CATGACGATC TGACGTCAAA CCTCTGTTAT GATTGGGGCT TTGTCGAAGA GAACAAGGAT
GCGGTGGCCA AGGCCTTTGA TGAGGCCGCC CATGTAACCA CGCTCGAGTT GGTCAACAAT
CGTTTGGTCG CCAACCCGAT GGAGCCGCGC GTGGCGGTGG GCGATTTCAA CCGCGCTACC
GGCGAAAGCA CGCTTTATAC TACAAGCCAG AACCCGCATG TGATCCGGCT CCTGATGGGC
GCCTTTGTGC TCGGCATTCC GGAGCATAAA TTGCGCGTGG TGGCCCCGGA TGTGGGGGGC
GGTTTTGGCT CCAAGATCTT CCACTACGCC GAAGAAGCGT TTTGCACCTT TGCCGCCAAG
GCGCTCAACC GCGCGGTGAA ATGGACCTCC TCGCGGTCCG AGGCCTTCAT GTCTGATGCC
CATGGCCGCG ATCATGTGAC CAAGATCGAA CTGGCGCTGG ACGCAGACAA CAACTTCACC
GCTCTGCGCA CCGAAACTTA CGCCAATATG GGGGCGTATC TCTCGACCTT CGCGCCCTCG
GTGCCGACCT GGCTGCATGG CACGCTGATG GCGGGCAACT ACAAGACGCC GCTCATTTAT
GTGAACGTCA AGGCGGTCTT TACCAATACG GTGCCAGTCG ATGCCTATCG CGGCGCTGGG
CGTCCCGAGG CGACCTTCCA GTTGGAGCGC GTCATCGACA AGGCCGCGCG CGAGCTGGAT
GTCGACCCGG TCGCGCTCCG GCGGCAGAAC TTTGTCACCG AGTTCCCCTA TGCCACGCCT
GTGGCGGTGG AATATGACAC CGGCGACTAT GTGGCGACGA TGGATAAGCT TGAAGAGATT
GCGGATATCG CAGGCTTTGC CGCGCGCCGC GCCGAGAGCG AGAAAAGCGG CAAACTGCGT
GGTCTGGGTG TCAACTGCTA TATCGAAGCC TGTGGTATCG CGCCCTCGAA CCTCGTGGGT
CAACTTGGTG CGCGCGCAGG GCTCTATGAG AGTGCGACGG TACGCGTCAA TGCAACTGGC
GGTATCGTGG TGATGACCGG CAGTCACAGC CATGGGCAAG GGCATGAGAC GTCCTTTCCG
CAGGTGATCG CCGAGATGAT CGGCATCCCC GAGGATATGG TGGAGATCGA GCACGGCGAC
ACCAACAACG CGCCGATGGG CATGGGCACC TATGGCTCGC GTTCCTTGGC GGTGGGCGGC
TCTGCCATGG TGCGCGCGAC CGAAAAGATC ATCAGCAAGG CCAAGAAGAT CGCGGCGCAT
CTGATGGAGG CTTCGGACGC CGATATTGAG CTTAAGGACG GGAGGTTCTC GGTGGCAGGC
ACGGATAAAT CCGTGGCCTG GGGCGATGTG ACCTTGGCGG CTTATGTGCC ACATAACTAC
CCGCTCGAAG AGATCGAACC GGGGCTGGAG GAGACGGCGT TCTATGATCC GGCGAACTTT
ACCTACCCGG CTGGCGCTTA TGCCTGTGAG GTCGAAGTGG ATCCCGAGAC TGGCAAAGTC
ACCATCGAGC GCTTTGCCGC TGCCGATGAC TTTGGCAATA TCGTTAACCC GATGATTGTG
GACGGTCAGG TCCACGGCGG AATTGGACAG GGCATTGGGC AGGCGCTTCT GGAGGGCTGT
GTTTATGACG AGGATGGTCA GCTCTTGTCC GCGAGCTTCA TGGATTACGC CATGCCGCGC
GCGGATGATG TGCCGTTTTA TCAGGTGGAT CATTCCTGCC AGACCCCCTG CACGCATAAC
CCTCTTGGGG TGAAAGGCTG CGGAGAGGCA GGGGCAATTG GATCTCCGCC AGCGGTGGTC
AATGCGGTGG TGGATGCGCT GCGCTCTGCC GGGAAGGATG TCACCCACAT CGACATGCCG
CTGACGCCGG CGCGGGTCTG GGCGGCGATG CAAGGTTGA
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| Protein sequence | MPKDIEAKES GIGAATKRRE DVRFLTGTGN YADDINVNGQ AYVHFLRSDV AHGRITSLET
AAAAAMPGVL RVFTGADFEG VGGLPCGWQV TDRFGEVMQE PAHPVLAQGK VRHVGDPIAA
VVAESAELAR DAAEAIELEI EELPAVIDMK AALAEEAPKV HDDLTSNLCY DWGFVEENKD
AVAKAFDEAA HVTTLELVNN RLVANPMEPR VAVGDFNRAT GESTLYTTSQ NPHVIRLLMG
AFVLGIPEHK LRVVAPDVGG GFGSKIFHYA EEAFCTFAAK ALNRAVKWTS SRSEAFMSDA
HGRDHVTKIE LALDADNNFT ALRTETYANM GAYLSTFAPS VPTWLHGTLM AGNYKTPLIY
VNVKAVFTNT VPVDAYRGAG RPEATFQLER VIDKAARELD VDPVALRRQN FVTEFPYATP
VAVEYDTGDY VATMDKLEEI ADIAGFAARR AESEKSGKLR GLGVNCYIEA CGIAPSNLVG
QLGARAGLYE SATVRVNATG GIVVMTGSHS HGQGHETSFP QVIAEMIGIP EDMVEIEHGD
TNNAPMGMGT YGSRSLAVGG SAMVRATEKI ISKAKKIAAH LMEASDADIE LKDGRFSVAG
TDKSVAWGDV TLAAYVPHNY PLEEIEPGLE ETAFYDPANF TYPAGAYACE VEVDPETGKV
TIERFAAADD FGNIVNPMIV DGQVHGGIGQ GIGQALLEGC VYDEDGQLLS ASFMDYAMPR
ADDVPFYQVD HSCQTPCTHN PLGVKGCGEA GAIGSPPAVV NAVVDALRSA GKDVTHIDMP
LTPARVWAAM QG
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