Gene TM1040_1761 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1761 
Symbol 
ID4076790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1851726 
End bp1852598 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content60% 
IMG OID638007076 
Productferredoxin--NADP(+) reductase 
Protein accessionYP_613756 
Protein GI99081602 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.451756 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAACG AGATTACGCC CGTGAGTGAG CCTGTGACCG AAGCCGCCGC GCCTGCAAAG 
GCCAAACCCG CCCTGCCCGA CGCCCAGACC GTGACGCAAG TGAAACACTG GACTGACCGG
CTGTTTTCCT TCCGCTGCAC CCGGCCTGCC TCCCTGCGGT TCCGCTCGGG CGAGTTTGTG
ATGATCGGCC TGATGGGCGA CCCGGACCCA AAGACCGGCA AGCAAAAGCC CCTGCTGCGC
GCCTATTCCA TCGCATCGCC CTCCTGGGAC GAGGAAATGG AGTTCTACTC CATCAAGGTT
CAGGACGGCC CGCTCACCTC GAAACTGCAG CACATCAAGG TTGGCGATGA AATCATCCTG
CGCCCCAAAC CAGTGGGCAC GCTGGTGCAC GATGCGCTTT TGCCCGGCAA ACGGATCTGG
TTCTTTGCAA CCGGCACCGG TTTTGCGCCC TTCGCCTCCC TGCTGCGCGA GCCGCAGACC
TATGAGGATT ATGATGAGGT CATCATCACC CACACCTGCC GCGAGGTAGG CGAGCTGACC
TATGGCCGCG AGCTGATCGA GAGCTTGAAG GAAGACGAGC TCCTCAATGA GGTGATTGGC
GAAGGATTCT GGAAGAAGAT CAAATACTAC CCGACCACCA CCCGAGAAGA GAGCGCCAAG
ATGGGCCGCA TCACCGACCT GATGCGCTCG GGCGAGGCCT TTGCAGATCT GGGCGTGCCG
CCGCTGAACC CGGAAAGCGA CCGCGCAATG ATCTGCGGCA ACCTTGCTTT CAACCTCGAG
CTCAAGGATC TCTTCGAGAA TACCTATGGC CTGGAAGAAG GTGCCAATTC CAAGCCTGCG
CATTTTGTGG TGGAAAAAGC CTTCCTCGAC TGA
 
Protein sequence
MMNEITPVSE PVTEAAAPAK AKPALPDAQT VTQVKHWTDR LFSFRCTRPA SLRFRSGEFV 
MIGLMGDPDP KTGKQKPLLR AYSIASPSWD EEMEFYSIKV QDGPLTSKLQ HIKVGDEIIL
RPKPVGTLVH DALLPGKRIW FFATGTGFAP FASLLREPQT YEDYDEVIIT HTCREVGELT
YGRELIESLK EDELLNEVIG EGFWKKIKYY PTTTREESAK MGRITDLMRS GEAFADLGVP
PLNPESDRAM ICGNLAFNLE LKDLFENTYG LEEGANSKPA HFVVEKAFLD