Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1743 |
Symbol | |
ID | 4075807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 1838226 |
End bp | 1838576 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 638007057 |
Product | copper resistance protein CopC |
Protein accession | YP_613738 |
Protein GI | 99081584 |
COG category | [R] General function prediction only |
COG ID | [COG2372] Uncharacterized protein, homolog of Cu resistance protein CopC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.112709 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACCA TGAAGAAAAC CGCACTGATC GTTTGGCTTG CCTGCATTTC TTCAGGCGCG TTTGCCCATT CCAGAGTGGA TACGACCACC CCTGCGGATG GCGACGTCAT GTCGGAGGTT CCGGCGCAGA TCAGCTTTGA TTTTGCGGAT GACATTCGTC TCACGCGGGT CGAAATGACC CACGCAGAGC ATCCGTCGGT GCAATTGGAC CTGGGCGATC AAAAGAGCTT TGATCGCGCG TTCAACCTGC CTTTGAACGA CATGGGGGCG GGCACCTACC AGATCGAGTG GCGCGGGCTC AGCATTGACG GCCATGCGAT GCAGGGCGGC TTTACTTTCG AAGTGGAGTA A
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Protein sequence | MKTMKKTALI VWLACISSGA FAHSRVDTTT PADGDVMSEV PAQISFDFAD DIRLTRVEMT HAEHPSVQLD LGDQKSFDRA FNLPLNDMGA GTYQIEWRGL SIDGHAMQGG FTFEVE
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