Gene TM1040_1743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1743 
Symbol 
ID4075807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1838226 
End bp1838576 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content56% 
IMG OID638007057 
Productcopper resistance protein CopC 
Protein accessionYP_613738 
Protein GI99081584 
COG category[R] General function prediction only 
COG ID[COG2372] Uncharacterized protein, homolog of Cu resistance protein CopC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.112709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACCA TGAAGAAAAC CGCACTGATC GTTTGGCTTG CCTGCATTTC TTCAGGCGCG 
TTTGCCCATT CCAGAGTGGA TACGACCACC CCTGCGGATG GCGACGTCAT GTCGGAGGTT
CCGGCGCAGA TCAGCTTTGA TTTTGCGGAT GACATTCGTC TCACGCGGGT CGAAATGACC
CACGCAGAGC ATCCGTCGGT GCAATTGGAC CTGGGCGATC AAAAGAGCTT TGATCGCGCG
TTCAACCTGC CTTTGAACGA CATGGGGGCG GGCACCTACC AGATCGAGTG GCGCGGGCTC
AGCATTGACG GCCATGCGAT GCAGGGCGGC TTTACTTTCG AAGTGGAGTA A
 
Protein sequence
MKTMKKTALI VWLACISSGA FAHSRVDTTT PADGDVMSEV PAQISFDFAD DIRLTRVEMT 
HAEHPSVQLD LGDQKSFDRA FNLPLNDMGA GTYQIEWRGL SIDGHAMQGG FTFEVE