| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1715 |
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| Symbol | |
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| ID | 4078291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1812653 |
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| End bp | 1814482 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638007029 |
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| Product | Poly(R)-hydroxyalkanoic acid synthase, class I |
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| Protein accession | YP_613710 |
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| Protein GI | 99081556 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
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| TIGRFAM ID | [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAA CGGACAAGTC TATTGAAGCT TCATCTGCGG AACAGATTGA CCAGCTTAAA
GAAAATTTGG TGCGCGTAGA GCAACTCTCC AAGCGTTTGA TCGAAGTTTT GGCTCAGAAG
AAGGGTCACA ACCCCGGATT GGACGCTCCG AATCAGGAAC TTTTCGCGCG TGCAGCATCG
TCCTATTGGG CTGCGATGGC ACAGAACCCC ACCCGCCTGC TTGAACAACA AGTTCAATAT
TGGGGCAAGT CGGTGCAAAA TTTTGCAGAA GCGCAGCAGG CCATGGCACA GACGCTGGCC
GCCGCGCAGA ATGAGGAGGG CGAGACTACA GAGCGCCCCG CGGTAAACGA TCGTCGGTTC
GCCAATCCGA TGTGGGAGAC CAATCCCTAT TTCCGGTTCC TGCGCGATCA GTACCTGACC
AATGCGGAGG CCATCCGTAC CGCTGTGGAC GAGGTCGAAG ATCTCGATCG GGTGGATCGG
CAGCGGCTCG GTTATTTTGC CGATCAGATC ATCAACATGA TGGCTCCGAC CAATTTCCTC
GCGACAAACC CGGACGCTCT GGAAAAGGCG CTGGAAACTG ACGGGCAATC CCTGATCGAC
GGGTTGGAGA ATCTCGTGGC CGATCTGGAG GCCAATGATG GCGAGTTGAT CGTTCGCCTC
GCCGATGAGA ACGCCTTTGA GATCGGTCAC AACATCGCCA CCACCCCCGG CGAGGTGGTC
TATCGCAACC GGATGATGGA GCTTATCCAG TATCATCCCA CCACCGAGAC GGTGCACGAA
ACGCCCATCG TGCTGTTCCC GCCCTGGATC AACAAGTTCT ACATCCTCGA TCTCAAGGAA
AAGAACAGCC TGATCAAATG GATCACAGAT CAGGGTTACA GTCTGTTTGT GGTCTCATGG
ATCAATCCCA ATTCGGACTA TGCTGATGTC GGCATGGAGG ATTACATCGA GGAGGGGTTC
CTCAAGGCCA TCGAGGTCGC CAAGGAGATC TCCGGCACCA AGCAAGTGAA TGCAGTGGGC
TACTGCATTG CGGGCACCAC GCTCAGCCTG ACGCTGTCGC TCCTGAAACA GCGCGGCGAC
AAATCGGTGA AGTCCGCGAC ATTCTTTACC GCGCTCACCG ATTTCTCCGA TCAGGGGGAT
TTTACGCCCT TCCTGCAAAA CGATTTTGTC GATGCGATCG AAGCGGAGAT CGGCGAAGAC
GGGATCATGC CGCACTACAT CATGGCGCGG ACTTTCTCGT TCCTGAGGGC CAATGATCTG
GTCTATGGCC CGGCCATCCG CAGCTATATG ATGGGCGAGA CCCCACCGGC CTTTGATCTT
CTTTATTGGA ATGGCGACGG CGCCAATCTG CCGGGAAAAA TGGCGGTGCA GTATTTGCGG
GGGCTCTGCC AGGACAACAA GTTTGTGACC GACGGGTTCG AGCTCTTTGG GCATACGCTG
CATGTGCGCG ATGTGGACGT GCCGCTGATG GCGATCACCT GCGAGACCGA CCACATTGCG
GCGTGGAAAC AATGCTATCG CGGCGTGCAA CAGATGGGCT CGCGCTCCAA GAGCTTTGTG
GTGAGCCAGT CCGGTCACAT CGCGGGTATC GTCAATCCCG TGAGCCGCAA CAAATACGGT
CATTATGTCA ACGGCGATCT CAGTCTCGAT GCCGACGACT GGATGGAGGG CGCAGAGTTC
ACCGAAGGAT CCTGGTGGCC GCGCTGGGAG GCGTGGCTCA AGAAACGTTC GGGCAAGCAG
GTGCCCGCGC GGGTGCCAGG GGCGCATAAA TCCTATCCGG TGCTTGAACA GGCGCCGGGC
AACTATGTGC GTGCCAAGGC GCGTGGATAA
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| Protein sequence | MTTTDKSIEA SSAEQIDQLK ENLVRVEQLS KRLIEVLAQK KGHNPGLDAP NQELFARAAS
SYWAAMAQNP TRLLEQQVQY WGKSVQNFAE AQQAMAQTLA AAQNEEGETT ERPAVNDRRF
ANPMWETNPY FRFLRDQYLT NAEAIRTAVD EVEDLDRVDR QRLGYFADQI INMMAPTNFL
ATNPDALEKA LETDGQSLID GLENLVADLE ANDGELIVRL ADENAFEIGH NIATTPGEVV
YRNRMMELIQ YHPTTETVHE TPIVLFPPWI NKFYILDLKE KNSLIKWITD QGYSLFVVSW
INPNSDYADV GMEDYIEEGF LKAIEVAKEI SGTKQVNAVG YCIAGTTLSL TLSLLKQRGD
KSVKSATFFT ALTDFSDQGD FTPFLQNDFV DAIEAEIGED GIMPHYIMAR TFSFLRANDL
VYGPAIRSYM MGETPPAFDL LYWNGDGANL PGKMAVQYLR GLCQDNKFVT DGFELFGHTL
HVRDVDVPLM AITCETDHIA AWKQCYRGVQ QMGSRSKSFV VSQSGHIAGI VNPVSRNKYG
HYVNGDLSLD ADDWMEGAEF TEGSWWPRWE AWLKKRSGKQ VPARVPGAHK SYPVLEQAPG
NYVRAKARG
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