| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1705 |
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| Symbol | |
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| ID | 4078281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1800686 |
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| End bp | 1802995 |
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| Gene Length | 2310 bp |
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| Protein Length | 769 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638007019 |
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| Product | xanthine dehydrogenase, molybdenum binding subunit apoprotein |
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| Protein accession | YP_613700 |
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| Protein GI | 99081546 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.684679 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAAC GGGTCGAAAA ATTTGGGAAG AGTCAGCCGC TCGCACGGGT GGAGGACCAG
CGTCTGCTGA CCGGACAGGG GCGCTACATC GAGGATACCA TGCCTGCGGG GGCATTGCGG
GCCTATGTGT TTCGCAGCCC CGTCGCGCAT GGCGAGATCA CCACGCTCAA TGTCGATGAT
GCGCGCGCAG CCGAAGGCGT GCATCTGGTG ATTACGCAGG CCGATCTGGT TGATGCGGGG
ATTGAGGCCA CGCTTGATGG TGCTTTGGTC AAGAATATTG ACGGCAGCAA GGCTGCAGCT
CCCGAACGGC CGGTGCTGGC AGGGCACCGC GTGCGCTATG TCGGGGAGCC CGTGGCCGTG
GTCATCGCCG ACACCATGGA TCAGGCGCGT GACGCCGCCG AATTGATCGA GTTTGACTAC
GAGGATCTCG ACGTGAAGCT AGATCTGGCC GCAGGCGGCG CAGAGATTCA TCCCGAGGCA
CCTCAGAATC GCGCCTTCAA CTGGGGGCTT GGCGACAAGG CTGCAACCGA TGCGGCCTTT
GAAGCTGCCG CTCATACGGT CAGCCTGCAG GTCGACGACA ACCGCATCAT CGTCAACGCG
ATGGAGCCAC GCGGCTGTCA CGCCACCTGG CAGGATGGGC GCATGCATTT TTACTATGGC
GGGCAGGGCG TCTGGTCCAT GAAGGAGCAG TTGGCCAAGA AAATGCATCT CCCCGCCGAA
GATGTACATG TGGTGACGCC GGATGTGGGC GGCGGCTTTG GCATGAAAGC AATGCCCTAT
CCGGAGTATT TTGCCGTCGC CTATGCAGCC AAGGTGCTGG AGCGGCCCGT GGGCTGGATG
TCGGATCGCA CCGAAGCCAT GCTGAGCGAC AATGGCGGGC GGGATCTCAC CTCTCTGGCC
GAGCTGGCCT TTGACGCGGA TCTGAAGATC ACGGCTTACC GCGTCCATAC GCATTGCAAT
CTCGGCGCCT ATAACTCTCA TTTTGGCCAG CCCATTCAGA CCCAGCTGTT TTCTCGGGTG
CTGGCAGGGG TTTACGACAT CCAGACCGCG TGGCTCGAAG TGGATGGGAT CTATACCAAC
ACCACGCAGG TGGATGCGTA TCGCGGGGCG GGGCGGCCCG AGGCGATTTA TGTGCTCGAG
CGGGTCATCG ACCGGGCGGC GCGCGATCTT GGCGTTGATC CGATGGACCT GAGGCGCAGG
AACTTCATCG CGCCGCAAAA GTTTCCCTAC AAGACCGTCA CCGATGAGAC CTATGACGTG
GGGGATTTCA ACCTCGTGCT CGACCGTCTC ATCAAAGAAT CGGATCTGGC CGGGTTCGAG
GCGCGGCGCG CGCAGGACGC GGCAGAAGGT CGTTACCGGG GCGCGGGCCT TTGTTACTAT
ATCGAAAGTA TTTTGGGCGA TCCTTCAGAG ACTGCAGACG TCGAGTTTCT GGAGGACGGC
CGGGTGAACA TCTATGTGGG TACGCAAAGC AACGGGCAAG GGCATGAAAC TGTCTTTGCG
ACGTTCCTTG CGGACCAGAC CGGCATCCCC GTCAGCGCCA TTTCGGTTGT CCAGGGCGAC
AGTGACCGCA TCGCCAAGGG CGGCGGGACC GGCGGCTCTC GTTCCGTGAC CACACAGGCC
AATGCCACAT TGGCCACCGT CGACAAGATG GTGGCCGCCT TCACCCCCTT CCTTGCCGAA
GAAATGGGCG TGGATGAGGA GGCTGTCGAC TTTGATGGTG AGACCTTCCG CGCGCCGGGG
TCCAATCTCA CCCCGACGGT GCTTGAGGCG GCTGACCTGG CCCGTGAAAA GGGGCGCGTA
GACCTGTTGC GCCATCAGGC CGAAGCATCA CTGCCGGGAC GTTCCTTCCC CAACGGGGCC
CATCTCGCCG AGGTCGTGAT CGACCGTGAA ACCGGGCAGG CCCGCGTTGA CCGCTATACG
GTGGTTGATG ATTTTGGAAA TCTTATCAAC CCCATGCTGG CCGAAGGTCA GGTGCATGGC
GGGGTCGCTC AGGGGCTAGG GCAGGCAATG CTTGAACATG TGGTCTACGA CGCGGATGGC
CAGTTGCTCA CGGCAACGTT CATGGACTAC GCGATGCCGC GCGCCGAAGA TATGCCTTGG
GTGGATTTCA CCTCGGAGCC GGTGCCATCG ACGCAGAACC CGATGGGAAT GAAGGGCTGC
GGCGAGGCGG GCACGGTTGG GGCCCTCGCA GCAGTGGCCA ATGCGGTTCA GGATGCGCTC
TGGGATCAGG GCATCCGGCA GGTGGATATG CCGTTCACGC CGGTCAAACT TTGGGAGTTG
ATGAGGGATG TTTCTCAAGC GGCTGAGTAA
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| Protein sequence | MNQRVEKFGK SQPLARVEDQ RLLTGQGRYI EDTMPAGALR AYVFRSPVAH GEITTLNVDD
ARAAEGVHLV ITQADLVDAG IEATLDGALV KNIDGSKAAA PERPVLAGHR VRYVGEPVAV
VIADTMDQAR DAAELIEFDY EDLDVKLDLA AGGAEIHPEA PQNRAFNWGL GDKAATDAAF
EAAAHTVSLQ VDDNRIIVNA MEPRGCHATW QDGRMHFYYG GQGVWSMKEQ LAKKMHLPAE
DVHVVTPDVG GGFGMKAMPY PEYFAVAYAA KVLERPVGWM SDRTEAMLSD NGGRDLTSLA
ELAFDADLKI TAYRVHTHCN LGAYNSHFGQ PIQTQLFSRV LAGVYDIQTA WLEVDGIYTN
TTQVDAYRGA GRPEAIYVLE RVIDRAARDL GVDPMDLRRR NFIAPQKFPY KTVTDETYDV
GDFNLVLDRL IKESDLAGFE ARRAQDAAEG RYRGAGLCYY IESILGDPSE TADVEFLEDG
RVNIYVGTQS NGQGHETVFA TFLADQTGIP VSAISVVQGD SDRIAKGGGT GGSRSVTTQA
NATLATVDKM VAAFTPFLAE EMGVDEEAVD FDGETFRAPG SNLTPTVLEA ADLAREKGRV
DLLRHQAEAS LPGRSFPNGA HLAEVVIDRE TGQARVDRYT VVDDFGNLIN PMLAEGQVHG
GVAQGLGQAM LEHVVYDADG QLLTATFMDY AMPRAEDMPW VDFTSEPVPS TQNPMGMKGC
GEAGTVGALA AVANAVQDAL WDQGIRQVDM PFTPVKLWEL MRDVSQAAE
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