| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1697 |
|---|
| Symbol | |
|---|
| ID | 4078273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | + |
|---|
| Start bp | 1793908 |
|---|
| End bp | 1794294 |
|---|
| Gene Length | 387 bp |
|---|
| Protein Length | 128 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638007011 |
|---|
| Product | glutathione-dependent formaldehyde-activating, GFA |
|---|
| Protein accession | YP_613692 |
|---|
| Protein GI | 99081538 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3791] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.066667 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.902632 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACGC ATACTGCCAG CTGCCATTGT GGCGCCGTCG AAATTTCAGC CCGCTTCCCA
AACGGTCTCG CCTCAGCCAG CCGCTGCGAC TGCTCCTTCT GCCTGCGCCG GGGCGCAGCC
GCTGTTACAG CCACCACAGA GAGCCTGCAG ATCCTGCGCG GTGCCGAAAA CCTCAGCCTC
TACACTTGGG GCACCCACAC GGCCCAACAC CACTTTTGCA AGACCTGCGG CATCTACGTC
TATCACCAGC GCCGCTCCAA CCCCGCAGAA TGCGGTGTAA ACCTTGGCTG CATCGACACC
GGAAACCCGC GCACCCACGC CGAGATCTAC GGCGAAATCC CCTGGCGCGA TGGCGTCAAT
CACCCCTCCG ACACTGATGG TGATTGA
|
|---|
| Protein sequence | METHTASCHC GAVEISARFP NGLASASRCD CSFCLRRGAA AVTATTESLQ ILRGAENLSL
YTWGTHTAQH HFCKTCGIYV YHQRRSNPAE CGVNLGCIDT GNPRTHAEIY GEIPWRDGVN
HPSDTDGD
|
|---|
| |