| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1692 |
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| Symbol | |
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| ID | 4078268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1787053 |
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| End bp | 1788099 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 638007005 |
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| Product | phage integrase |
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| Protein accession | YP_613687 |
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| Protein GI | 99081533 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.50677 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGACGCC CGAATAAGCC ACGTATCGTC AAGCCGGGGC TTGTTTGGAA ATGGGACACC
CGCAACTCGA TCTGGGTGCC CTATCACCGT GTGAACTGGA CAGAGGGCGG CAAGAGAAAG
CAGCGAACGA CAAAGCTGGA CTGGCGGGGC GACTCTGAGC GCCTCGACAT GCTTTATTGG
CAGTGCCGAG CTGGCAAACA CAAAAAACAG ACAGCTCCGG CGAAGTACAC GTGGCGGCAA
CTTATCACCG CGTGGCGCGA AGATCCGCGT GTTCAGTCTC GATTGGCGGA TGGAACAAAG
CGCAGCTATT CCAGAACGAT GGAAGCCATA CTTGATAAGA ACAGTGACAA GGACGTGAGG
CGAACCACAC GCCAAGCAAT TCGAACCGCG CACTCCAAGA TGTCCGAAAC TCCGAGGAAA
GCGGACAAGT ATCTGCAGAC CGTGAGCCTT CTTTGGAACT ATGGCGCCGA GAAACTAGAC
TGGCCCCTCG GTCCAAATCC AGCGAAAGGC ATTGAACACT TCGGTAAGCA GAGCGAGTAT
GAGCCCTGGC CGGAATGGAT GGTCGACAAG CTCAAGGATG CGCCGGAACA TGTGCGCACT
GCCGCTGAAT TGATCCTAGG GACAGGTCAG AGACCCAATG CGGCCATTCA CATGAAGTTC
GCACACTTTG ACGGCGAATG GATGAGCGTC CTTGATGAGA AGAGCGACGA ACGGATTGAT
GTTTATTGTC CTCCAGCCCT GCGCGAGTTC ATCTCGCGAG CGCCACGCAA CGGAGCTTAC
GTTTTAGCGA AGAACCTTAC AGAGCCCCGA GGCTACTGGT CGATCTCTTC ATCATTTCGC
ACATGGCGCG ATGCACTCGG CCCGGAGGCG AAGAAGTACG TTCTGCATGG CCTGCGCAAA
CTCTCTATCA TCCGCCTCGC CGAGGCTGGT TGCAGTGATG CCGAAATTCA AGCCGTTACG
AACCAAAGCG CAGAGATGGT GGCTTACTAT CGCTCTCGGG CCAGCCGCAA AGCGCTCTCA
CGCGCCGCTC AAGAGCGCCG AAAGTGA
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| Protein sequence | MRRPNKPRIV KPGLVWKWDT RNSIWVPYHR VNWTEGGKRK QRTTKLDWRG DSERLDMLYW
QCRAGKHKKQ TAPAKYTWRQ LITAWREDPR VQSRLADGTK RSYSRTMEAI LDKNSDKDVR
RTTRQAIRTA HSKMSETPRK ADKYLQTVSL LWNYGAEKLD WPLGPNPAKG IEHFGKQSEY
EPWPEWMVDK LKDAPEHVRT AAELILGTGQ RPNAAIHMKF AHFDGEWMSV LDEKSDERID
VYCPPALREF ISRAPRNGAY VLAKNLTEPR GYWSISSSFR TWRDALGPEA KKYVLHGLRK
LSIIRLAEAG CSDAEIQAVT NQSAEMVAYY RSRASRKALS RAAQERRK
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