Gene TM1040_1679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1679 
Symbol 
ID4075782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1777291 
End bp1777863 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content57% 
IMG OID638006992 
ProductMT-A70 
Protein accessionYP_613674 
Protein GI99081520 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG4725] Transcriptional activator, adenine-specific DNA methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCAT TCTCAAATTT CGCTGACATG CCGCTGTTCC GCTATGGCCT GATCATGGCA 
GATCCGCCGT GGTCTTATGA GAATTGGTCG GCAAAAGGAG ACCACAAGAA CGCAAGCGCG
AAATATGATT GCATCGGCCT GGACGACATC AAGGGAATGC AGGTCGGTCA TCTAGCGGCT
GAAAGCTGCG TTTTGTGGCT TTGGGCCACC AACCCGCTGC TGGATAAGGC TTTCGAGGTC
ATGGAGGCAT GGGGGTTCCA ATCCAAGACC GCAGGCCATT GGTCAAAGAA GACCTCCGGC
GGTAAGCAAG CCTTCGGCAC GGGCTATATC CTTCGTTGTG CCGGTGAACC CTTCCTGATC
GGCACCGTTG GGAATCCAAA GACCGCGAGA AACGTTCGAT CGGTAATCGA AGGGCCCTTG
CGCGAGCATT CTCGAAAGCC AGAGGAGGCT TTCGCAGCAG CTGAGGCCCT TTGCGGTGAT
GTTCCTAGGC TAGAGCTTTT CAGCCGCCAA GAGCGGACAG GCTGGGACGT GTTCGGGAAC
GAGGTCGACA AGTTTCAGGG GGCGGCCGCA TGA
 
Protein sequence
MAAFSNFADM PLFRYGLIMA DPPWSYENWS AKGDHKNASA KYDCIGLDDI KGMQVGHLAA 
ESCVLWLWAT NPLLDKAFEV MEAWGFQSKT AGHWSKKTSG GKQAFGTGYI LRCAGEPFLI
GTVGNPKTAR NVRSVIEGPL REHSRKPEEA FAAAEALCGD VPRLELFSRQ ERTGWDVFGN
EVDKFQGAAA