| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1674 |
|---|
| Symbol | |
|---|
| ID | 4075777 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 1774102 |
|---|
| End bp | 1774671 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638006987 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_613669 |
|---|
| Protein GI | 99081515 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTGGT ATCTGGGCAG AACGACCACC CGGCACATCG CACCCGAACC CGGCGCCGAA
AAAGAGCGCG GAGAGTTCGC GGTGGAGCGC CAGCTGCGCG CGTTGGGCAT CGAGGCCCAC
GCCCCCCGCA GGATCGAGTT TAAGCGGGTC GGCAAGAAGC GCCACGCCGA ACCGATCACA
AGCGCGTATC TGCCGGGATA CATCTTCGCA GAGATCCCTG CGTCCATGTT TACCCGCGCG
ATCCAATGCC GAGGGTTGAG CGCTTCCCTC ATGGCTGTGC CGGCCCAAGA AGTCTTGCAC
CATGTAAAAC CCTTCATCGC CAAGGTGAAA TCAGAGAACG CTGATGCAGA ACGGATCATC
GAAAGCCGCG ATCGCGCTGC AATGTGCCAG TTTCAGCCGG GGGAGGCGCT CGACGTTCTG
GCTGGCCCCT TCGCTGAGCG ACTGGTGAAG TTCACCCGGA TGGTTGAGGC TGCACACGAC
TCATACCCGA TGATCGAGGC GCAGATCGAG ATCCTCGGTC GCCTGACGCG CGTGAAGATT
GATCCGCTGG ATGTGCGAGC TGCCTCTTGA
|
|---|
| Protein sequence | MTWYLGRTTT RHIAPEPGAE KERGEFAVER QLRALGIEAH APRRIEFKRV GKKRHAEPIT
SAYLPGYIFA EIPASMFTRA IQCRGLSASL MAVPAQEVLH HVKPFIAKVK SENADAERII
ESRDRAAMCQ FQPGEALDVL AGPFAERLVK FTRMVEAAHD SYPMIEAQIE ILGRLTRVKI
DPLDVRAAS
|
|---|
| |