| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1653 |
|---|
| Symbol | |
|---|
| ID | 4075756 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 1754507 |
|---|
| End bp | 1754854 |
|---|
| Gene Length | 348 bp |
|---|
| Protein Length | 115 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638006966 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_613648 |
|---|
| Protein GI | 99081494 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.53128 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGGTA TTGGCCGCAG TAACTGGTAC ATCCGCCACG GGGACGGATA CTTCACCACA
ACTGAACTCG CATGGGAGAT TGGAGCCAAG GGCTCCGGTC TCTTTATTTA CGTGCCTCCG
GGCTTTGCCT TTGACGTCTC GATTCCTCGC TGGGCCGGGT GGATCTTCGA CCGGCACGAT
CCCCGCTATC TGAAAGCTGC TGCGCTGCAT GATTACGCCC TCCACCGGCT CGGTTGGGGG
CGGGTCAGCG CGGCTGCACC CTTTTCCGAA GCGCTGCGCG CCGCTGGCGT CTCGCGCATC
CGCAGGCTGG CAATGGTTCT GGCCGTCACT ATCCACAAAT GGAGATGA
|
|---|
| Protein sequence | MTGIGRSNWY IRHGDGYFTT TELAWEIGAK GSGLFIYVPP GFAFDVSIPR WAGWIFDRHD
PRYLKAAALH DYALHRLGWG RVSAAAPFSE ALRAAGVSRI RRLAMVLAVT IHKWR
|
|---|
| |