| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1642 |
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| Symbol | |
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| ID | 4075745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1745947 |
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| End bp | 1747818 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006955 |
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| Product | ParB-like nuclease |
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| Protein accession | YP_613637 |
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| Protein GI | 99081483 |
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| COG category | [K] Transcription |
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| COG ID | [COG1475] Predicted transcriptional regulators |
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| TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGC ACAGCCCTCT GAACCATCCC GACGCCCCGC TGCAATACCT CCCGTTGTCC
GAGCTTTACT TGCACGACAT GAACCCGCGC CAGGACACGC CTGACGACGA CGTCGCAGCG
ATGGCGGATT CAATCACCGT GAACGGTCTC TTGCAGAACC TTCTGGGCTA TCGCGACCCC
GCAAACTCCG GCGTCGGCAT TGTTGCGGGT GGCCGTCGCC TGCGCGGGTT GATCCACCTA
GGCAAGAACG GCGCGCAGAT GCTGGACAGC AAAGCACCTG ACCTGTCGGC CATTCCCGTT
CAGGTCACCG ATGATGCGTT CCTCGCCCGG GCATGGGCCG GCACGGAATC CGCAACGCAA
AAACCCTTAC ACCCGGCGGA TGAGATCCGG GCTTATGCTG CATTGGCGGA TCAGGGAAAC
TCGGCCGAGA TGATCGCGCG CACATTTGCC CAGACCGTGC GGCACGTGAA GGGGCGCCTC
GCCTTGGCCC ACCTTTGCAC AGCGACGATC GAGGCACTGC GCCGGGGCGA CATCACGCTT
GATGTTGCCA AGGCCCTCAC CCTCGCCCGT GATCCAGAGC AGGAGCTGGA AGTCCTGCAA
GGCGCGCTCG ACGGCAAAAG ACAGGAGTGG TGGGTCAAGC AGCAACTGAC CGACAGCAAA
GTTCGCGCGA GCAATTACAA GGCTGCGTAT GTCGGTCGGG ACGGCTATGT CGCCGCCGGC
GGGCGCATGC GCGATGACCT ATTCGATGAT GAATCCTATC TCGAGGATCC GGATATCCTG
GACGCCCTCT TCGAAAAGAA ACTTGCCGAC ATCGCCGAGG GTATCAAGGT GCAATTCGGC
TGGAACTGGG TCAAACCACA CTCGGAGTCT CACATCCCAT ATTCACTCAC GTCAAACCTG
ACGCAGGTGG CTGGGAAAAA GACGCCACTG TCAATGAAAG AGCAGAACGA ACAGGCCGAG
CTGCAGGACA AGGAATTCCG CGAGACGCTG ACACCTGCAG AGGCGAAGCG CCTGAATGAG
TTAGAGTCAA AGGCGAAGCC CTTCTGGGAA GAAGCGACTC GCGCGAAATG CGGAATATAC
GTCTATGTCG ATCACCGCGG AAAACTGTGC ATTGACGGCG CGTACAAGGA TCAAAAGAGC
ACCAAGAAAA ACACCAGACC TGGTGATGCC GGCGCGGAAA CCGACATTCC AAGCCCAAAG
CTGACGCAGG CCGGCGTCGA AGATCTTCGC AGGATCCAGC TATTGGCCTT GCAGACAGCC
ACCTTGGGCA AGACAGAGCT GGTTCTGGAT CTCTTCGCGT GGCAGCTCGA ATGCGGCTAC
GCGACCTACA GTGGCCTGTT CAATATCTCC CTGACCGATC CGCAGATCGA ACCTGAGGCG
GAAGGCGCAT GGACCGTAGA CGACGCGCTT TCCGATGGCA GCAATCAGCG GGAGCTCGGG
AGAACGCAGG GCAACTATGC CGAAAGCTTC AAGACCTTCC AAGCCAAGGG CAAAAAGCAC
CGCAACACGG TGCTGACCCG TCACCTGATC CGGACAATCA ACGGCCAAAC CGTTAACGCG
CTTGGAACGT CCCTCTTGGC CCCAATGGTC GAACCTGACA TCCGTTCGGT CTGGACACCG
GACGCCCCCA CCTACTTCAG CCGGATCAGC AAGGCAGCGC TCGAAAGCCT CTGGCAGGAT
CTGGTGCTAG AGGGTCGACC CGAAGCCGAC GCCGCAGACT TCAATGCCAT GAGGAAGTCC
GATAAGATTG AGAACCTGCA TCGCTTGTTC AATGACGCTG ACTTTCGCAA AGCTCTTCAG
CTGGGGCCCG AGGCCGAGCA TCGGATTGCG ACCTGGCTGC CCCCGGAGAT GGAAACCGAG
GCCGCACAAT GA
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| Protein sequence | MTKHSPLNHP DAPLQYLPLS ELYLHDMNPR QDTPDDDVAA MADSITVNGL LQNLLGYRDP
ANSGVGIVAG GRRLRGLIHL GKNGAQMLDS KAPDLSAIPV QVTDDAFLAR AWAGTESATQ
KPLHPADEIR AYAALADQGN SAEMIARTFA QTVRHVKGRL ALAHLCTATI EALRRGDITL
DVAKALTLAR DPEQELEVLQ GALDGKRQEW WVKQQLTDSK VRASNYKAAY VGRDGYVAAG
GRMRDDLFDD ESYLEDPDIL DALFEKKLAD IAEGIKVQFG WNWVKPHSES HIPYSLTSNL
TQVAGKKTPL SMKEQNEQAE LQDKEFRETL TPAEAKRLNE LESKAKPFWE EATRAKCGIY
VYVDHRGKLC IDGAYKDQKS TKKNTRPGDA GAETDIPSPK LTQAGVEDLR RIQLLALQTA
TLGKTELVLD LFAWQLECGY ATYSGLFNIS LTDPQIEPEA EGAWTVDDAL SDGSNQRELG
RTQGNYAESF KTFQAKGKKH RNTVLTRHLI RTINGQTVNA LGTSLLAPMV EPDIRSVWTP
DAPTYFSRIS KAALESLWQD LVLEGRPEAD AADFNAMRKS DKIENLHRLF NDADFRKALQ
LGPEAEHRIA TWLPPEMETE AAQ
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