| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1624 |
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| Symbol | |
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| ID | 4077726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1731086 |
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| End bp | 1732372 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638006937 |
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| Product | Phage portal protein, HK97 |
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| Protein accession | YP_613619 |
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| Protein GI | 99081465 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4695] Phage-related protein |
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| TIGRFAM ID | [TIGR01537] phage portal protein, HK97 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0210145 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGAATTT TTGATTTCCT TCGGCCAGCG GCGACGCTGG CTGAACCAGC CGTGCGCGCT
GAACCACCGG TGTCTGCAGC TTCAGACACC TCGGTTTCGA GCGAACGTCA ATGGAAGGGT
TTTGTCGTTG CGGGCGGTCG ATCAAAGGCC GGCGTGCCGG TGAGCGAAAC CACCGCCTTG
ACCATTCCAG CCACCTTGCA GGCGCTTCGG ATCTTGACCG GCGTCTTTGC GATGACGCCG
CTGCATTTTT ACCAGAAGAC CGACAGGGGG CGGATGTCGG CCGAAGGCAA CCCGGCGGCG
CAGTTGTTTC GGCTGGGTCC AAACAGTCAC CAGACTGCCT ATGCGTTCTT TGAGCTCTTG
TTGGCGGACA TCCTGTTGAC CGGGAATTTC TACGGCTATG TCAGCCGGGA TTTTCGGGGC
GAGGTGAAGG CGGTGACCCG GCTGAAGCCC GGCCAGTGTC AGCCGGTCGA ATATTTCGAT
CGCGCCGAAG GATCGATCCT TTTTTTCGAT GCCACCTTGC CGGATGGAAG CCATGAGCGT
TTCCCGGCGC GTGATATCTT TCACGTTGGC GGGTTCTCTC GGGATGGGGT TCAGGGTCTC
AACCCCGTGC AATACGCACG TGATGCCTTG GGCGGTGCAA TTGCAACAGC GGATCACGCG
GCTCGGTTCT GGAACAAGGG CGGGCGCCCT TCGACGGTGC TGACCAGCGA GAAAGCCATT
GGGCCTACCG ATAAGGATCG GATCAAGACC GACTGGACCC AAATGTATTC GGGTCCAGAC
GCCGATATGG TTGCTGTCCT CGATCAAGAT CTAAAGGCCG AGTTCTTGGC TCATGATTTG
AAATCCAGCC AATATCTGGA AACGCGACAG TTTCAGGTGG TCGATCTCGC CCGAATCTGG
GGTGTGCCGC CGCACCTGAT CTTTGATTTG TCGCGCGCCA CCTTCGGTAA CATCGAGCAA
CAAAGCCTCG AGTTCGTCAT CTATCACTTG GGCCCCCATT ACACGCGGGT TGCCCAGGCC
GCGACTAAGG CCTTTGCCAA GATCGGGTTC TACTTTGAGC ATGTCACTGC CGAGCTAGTC
AAAGGCGACC TGAAGAGCAG GATGGAGGCT TATTGGCTGC AACGCCAGAT GGGCATGGTG
AACGGCAACG AACTGCGCAG CTACGAGAAC CTTCCCAACA TCGAAGGCAA TGCGGGGACG
GACTACTGGA TGCCGGCGAA CATGCAAGTA GCCGGAGCAT CTGCGGCGCC GGGCAGCACC
GAAGACACCA GCGGAGACCA ATCATGA
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| Protein sequence | MGIFDFLRPA ATLAEPAVRA EPPVSAASDT SVSSERQWKG FVVAGGRSKA GVPVSETTAL
TIPATLQALR ILTGVFAMTP LHFYQKTDRG RMSAEGNPAA QLFRLGPNSH QTAYAFFELL
LADILLTGNF YGYVSRDFRG EVKAVTRLKP GQCQPVEYFD RAEGSILFFD ATLPDGSHER
FPARDIFHVG GFSRDGVQGL NPVQYARDAL GGAIATADHA ARFWNKGGRP STVLTSEKAI
GPTDKDRIKT DWTQMYSGPD ADMVAVLDQD LKAEFLAHDL KSSQYLETRQ FQVVDLARIW
GVPPHLIFDL SRATFGNIEQ QSLEFVIYHL GPHYTRVAQA ATKAFAKIGF YFEHVTAELV
KGDLKSRMEA YWLQRQMGMV NGNELRSYEN LPNIEGNAGT DYWMPANMQV AGASAAPGST
EDTSGDQS
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