Gene TM1040_1607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1607 
Symbol 
ID4077709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1716410 
End bp1716757 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content61% 
IMG OID638006920 
Producthypothetical protein 
Protein accessionYP_613602 
Protein GI99081448 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000144684 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.566627 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGTA TTGGCCGCAG TAACTGGTAC ATCCGCCACG GGGACGGATA CTTCACCACA 
ACTGAACTCG CATGGGAGAT TGGAGCCAAG GGCTCCGGTC TCTTTATTTA CGTGCCTCCG
GGCTTTGCCT TTGACGTCTC GATTCCTCGC TGGGCCGGGT GGATCTTCGA CCGGCACGAT
CCCCGCTATC TGAAAGCTGC TGCGCTGCAT GATTACGCCC TCCACCGGCT CGGTTGGGGG
CGGGTCAGCG CGGCTGCACC CTTTTCCGAA GCGCTGCGCG CCGCTGGCGT CTCGCGCATC
CGCAGGCTGG CAATGGTTCT GGCCGTCACT ATCCACAAAT GGAGATGA
 
Protein sequence
MTGIGRSNWY IRHGDGYFTT TELAWEIGAK GSGLFIYVPP GFAFDVSIPR WAGWIFDRHD 
PRYLKAAALH DYALHRLGWG RVSAAAPFSE ALRAAGVSRI RRLAMVLAVT IHKWR