| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1597 |
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| Symbol | |
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| ID | 4078406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1707581 |
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| End bp | 1709071 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638006910 |
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| Product | succinate semialdehyde dehydrogenase |
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| Protein accession | YP_613592 |
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| Protein GI | 99081438 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.263811 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.212402 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACGCG CGCGAAAGAG TTGCCCTATC GCGACTGACA CCAATGAGGC CGAAATGCGC
AACTATCCCG ATCTCAAACT CTTTATCGGC GGCACATGGC GCGACACGCC TGAGACCCTC
TCGGTTGTGA ACCCGGCCAC GGAAGAAGAG CTGGGCCGCC TGCCCTGCGC GCGGATTTCG
GATCTTGAGG ACGCGCTGGC AGCGGCTCAA AAAGGGCTCG AGATCTGGCG TAACACCCCG
CCGCGCAGCC GGGCGGATCT GATATTGCGC GCTGCGCGCC TTCTGCGGGA TCGGCAAGAA
GAGATCGCGC AGTCCATTAC CGCCGAACAT GGCAAACCAC TGGCCCAGGC TCGGTTGGAA
GTCATTCGCG GCGCAGAGTT TTTCGAGTGG GACGCGGCAG AGGCCATGCG CACTTACGGA
CGCGTGATCC CCTCGGCGGC GGGTACAAAA ATCTCCGTGC ATCACCACCC CATTGGCGTT
GTCGCAGCCT TTTCACCATG GAACTTCCCC ATGAGCCAGC CTGCACGCAA GATCGCGGGT
GCCCTTGCGT CGGGCTGCTC CCTGATCCTC AAGGCAGCAG AGGAAACCCC CGCCGGGGCG
ATCCATATTG TCCGCGCGTT TCAGGACGCG GGCCTGCCCG ATGGTGTGCT CAATCTGGTA
TTTGGCCGCC CGGCGGAGAT TTCGGCTTAT CTCATCCCGC AGCCCTGCGT GCGGCTTGTG
GCCCTCACCG GATCCACCGC AGTGGGCCGC CAGTTGACAG CTCTTGCCGC CCAGAGCGAC
ACCCGCGTCC TGATGGAGCT TGGCGGGCAC GCACCGGTGA TCGTCTGCGA GGACACCGAT
GTGCAAAAGG CAGCCCTGAG CGGCGCCATC CGCAAGATGC GCAACGCGGG ACAGGTCTGC
ACATCGCCAA CACGGTTCTT TGTGCATCAA GACATCTTTG ATGAATTCGC GACCACCTTC
ACCCAACGGG CGGCGGCAAC TCGTGTGGGC AACGGGATGC ACGACGGGAT AGAAATGGGA
CCAACTGCCA ACGCCCGTCG CATTCCGGTT CTGACGGATC TGGTTAATGA CGCCCTCGCC
CAAGGCGCAA CGCTCTGCAC CGGCGGCACG CGCGTGGGGG AAAGGGGATA TTTCTTTGCC
CCCACGGTGC TGACACACGT GCCAGACAGC GCGCGCATCA TGCGCGAAGA GCCCTTTGGT
CCCATCGCGG TGCTCAACAC GGTGCGCAAC CTCGACGAAG CCATCGCGCA GGCAAACGCT
GTGGATTACG GGTTGGCAGG GTATGCTTTT ACAAATCGTG CGGACTATAT CGCGCGCATG
ATTGACGAGG TCGAAGTGGG CAATTTCTCC ATCAATACGC TTGAGGCCTC CTTGCCGGAG
ACCCCGTTTG GCGGAGTGAA ATCCAGTGGT TACGGGCGTG AAGGCGGCAC CGAAGGGCTT
GAGAGCTATC TCACCACGCG CAACGTCTGG CAAAGTTCTG ACATCACCTG A
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| Protein sequence | MPRARKSCPI ATDTNEAEMR NYPDLKLFIG GTWRDTPETL SVVNPATEEE LGRLPCARIS
DLEDALAAAQ KGLEIWRNTP PRSRADLILR AARLLRDRQE EIAQSITAEH GKPLAQARLE
VIRGAEFFEW DAAEAMRTYG RVIPSAAGTK ISVHHHPIGV VAAFSPWNFP MSQPARKIAG
ALASGCSLIL KAAEETPAGA IHIVRAFQDA GLPDGVLNLV FGRPAEISAY LIPQPCVRLV
ALTGSTAVGR QLTALAAQSD TRVLMELGGH APVIVCEDTD VQKAALSGAI RKMRNAGQVC
TSPTRFFVHQ DIFDEFATTF TQRAAATRVG NGMHDGIEMG PTANARRIPV LTDLVNDALA
QGATLCTGGT RVGERGYFFA PTVLTHVPDS ARIMREEPFG PIAVLNTVRN LDEAIAQANA
VDYGLAGYAF TNRADYIARM IDEVEVGNFS INTLEASLPE TPFGGVKSSG YGREGGTEGL
ESYLTTRNVW QSSDIT
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