| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1596 |
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| Symbol | |
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| ID | 4078405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1706570 |
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| End bp | 1707535 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638006909 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_613591 |
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| Protein GI | 99081437 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00637] ModE molybdate transport repressor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.49 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.186614 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACTC GCCACACCCG TATCGTTGAA CGCGCTCTGA CCCGGCTCAA GCTGCGCCAA
CTGAGGTTGC TTGTCGCCGT GGGCCAGCAT GGAAGCATTC AGAACGCGGC GCGCGATCTC
AACATCTCGC AACCAGCAGC GACAAAGATG ATCCAGGATC TCGAAGTGGA TTTTGAGGTC
AAACTGTTCG AGCGCACCAA TCGCGGCGTG GTCCCCACGG TCTTTGGAGA CTCGCTGATC
CGACATGGCA AACTGATATT CGCGCAGGTG TCCAACGCCG CACAGGAGCT CGATGATCTC
AATGAAGGCA ACAGTGGCCG AGTCGTGGTG GGTACGCTCT TGGCCGCATC GCCTTCGCTC
TTGCCGATGG CGGTCGAGCG TGTGCTACAG GACCGTCCAA AGGTCGCGAT CAAGATCGTC
GAAGGCACAC ATGAGGTGCT GATGCCCGGT CTTCTGTCGG GGGAAATCGA CATGGTCGTC
GGGCGCCTGC CCAGCCATCG CCACCGCGAG AATATCACGC AGGAAAAGTT CTTTGATGAG
AGGATCTTGG CAGTCGCCGG CCCGCAACAC CCCCTTGCCT GTGAAAGCAA CCTGACATTC
GACGATATCC GGCCTCATGG CTGGATTCTT CCCCCCATCG AGACCACGCT CCGGCGGCAG
ACCGATCAGT TTTTTATCCG TCAGGATCAG TACATGCCGC AAACCGCGAT CGAGTCAGTA
TCGTATCTGG CCAATCGCGC GCTTCTGCGC AGCCATGATT TCATCGGCTT GATGCCCGCA
CATGTTGCGG CCCTCGACAT TGAAAACGGG CTCCTGAAGC CGCTGGATTG GGTGGTGCCC
TTCGGGGCTG GTCCGGTGGG CGTCTCGTTT CGCGGCCAGC AGAGCCTCTC GCCGGCGGGA
GGTGCGCTCT TGGCGGCGCT TCATGCGGCG GCGGCAGAGA TTGCGCGTCT CACCCCCGCG
TCCTGA
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| Protein sequence | MATRHTRIVE RALTRLKLRQ LRLLVAVGQH GSIQNAARDL NISQPAATKM IQDLEVDFEV
KLFERTNRGV VPTVFGDSLI RHGKLIFAQV SNAAQELDDL NEGNSGRVVV GTLLAASPSL
LPMAVERVLQ DRPKVAIKIV EGTHEVLMPG LLSGEIDMVV GRLPSHRHRE NITQEKFFDE
RILAVAGPQH PLACESNLTF DDIRPHGWIL PPIETTLRRQ TDQFFIRQDQ YMPQTAIESV
SYLANRALLR SHDFIGLMPA HVAALDIENG LLKPLDWVVP FGAGPVGVSF RGQQSLSPAG
GALLAALHAA AAEIARLTPA S
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