| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1592 |
|---|
| Symbol | |
|---|
| ID | 4078401 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 1703050 |
|---|
| End bp | 1703613 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 638006905 |
|---|
| Product | 3-hydroxyanthranilate 3,4-dioxygenase |
|---|
| Protein accession | YP_613587 |
|---|
| Protein GI | 99081433 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03037] 3-hydroxyanthranilate 3,4-dioxygenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.388774 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCAGC ATCCGACATT GAAGCCCTTT AACTTTGAGA AATGGGTGGA ACAAAACGCG
GATAAGCTGC GCCCTCCGGT GGGCAATCAG CTGCTGCACA AGGAAGGCGA CATGATCGTG
ATGGTTGTGG GAGGGCCCAA CACCCGCATG GATTTTCATG ACGACCCGGT GGAGGAATGG
TTCTTCCAGC AAAAGGGCGA CATGATGCTC AAGATTGCCG ATGGGGGCAA AATCTATGAC
GTTCCAGTGC GGGAAGGCGA GGTCTTTATG CTGCCGCCCC ATGTTCGCCA CGCGCCGCAA
CGTCCGCAGG AGGGCTCGGT GGGGATCGTC GTAGAGGCGC CGCGCCAGCC CGGTATGAAA
GAAGGGTTCG AGTGGTACTG TTTTGAGTGC GAGGGGCTCG TTCACCGCGA AGAGGTGGCC
CTTGATGGAC CCGAGGGGAT CGTGACTGCG CTCCCAAAAA TCTACAGCAA ATTCCACGAC
AGTCTCGAGG CTCGCACCTG TCCACACTGC GGCGCGCTCC ATCCCGGCAA GGGGAAGCCA
CCTGCAGATT GGGTGCAGCT TTGA
|
|---|
| Protein sequence | MPQHPTLKPF NFEKWVEQNA DKLRPPVGNQ LLHKEGDMIV MVVGGPNTRM DFHDDPVEEW
FFQQKGDMML KIADGGKIYD VPVREGEVFM LPPHVRHAPQ RPQEGSVGIV VEAPRQPGMK
EGFEWYCFEC EGLVHREEVA LDGPEGIVTA LPKIYSKFHD SLEARTCPHC GALHPGKGKP
PADWVQL
|
|---|
| |