Gene TM1040_1581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1581 
Symbol 
ID4078390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1691081 
End bp1691368 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content55% 
IMG OID638006894 
Producthypothetical protein 
Protein accessionYP_613576 
Protein GI99081422 
COG category[S] Function unknown 
COG ID[COG4298] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAACA TGCGCAATGA AAACGCCCTG ATCACCAACC TCAACATCGC TGGCGTCGTG 
ATTGCCTACG CAATGCTCGG GATTTCGCTG TGGCTCTCGA CCGAAGTGCC GCTTTCGACC
AAAGGCTATT GGGCGATGGG GATTTTGCTG CTGACGCTGA GCCTCATCAA CGTGGTGAAA
TACCGTTTCG ACATCCGCCA GAGCGAAGAT CGCATTCGCC GGATCGAGGA TATTCGCAAC
GAGCGCATGC TTGAGGACGC GTTGAAAGAT CCCGCATCCG AGGTCTGA
 
Protein sequence
MSNMRNENAL ITNLNIAGVV IAYAMLGISL WLSTEVPLST KGYWAMGILL LTLSLINVVK 
YRFDIRQSED RIRRIEDIRN ERMLEDALKD PASEV