| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1579 |
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| Symbol | glyA |
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| ID | 4078388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1688939 |
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| End bp | 1690234 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638006892 |
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| Product | serine hydroxymethyltransferase |
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| Protein accession | YP_613574 |
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| Protein GI | 99081420 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACG CGACCCGCGA CCCCGGTTTC TTCACCCAAA GCCTCTCTGA GCGCGACCCA
GAGCTTTTTG GCGCAATCAC CGATGAACTC GGTCGTCAGC GCGACGAGAT CGAGCTGATC
GCCTCCGAAA ACATCGTCTC TGCTGCCGTC ATGGAAGCGC AGGGCTCTGT GCTGACCAAC
AAGTATGCCG AAGGCTACCC GGGCCGTCGC TATTATGGCG GCTGCCAGTA TGTCGACGTG
GCCGAAAACC TCGCCATCGA CCGGGCCAAG CAGCTGTTCA ACTGCGAATT TGCCAATGTG
CAGCCCAACT CCGGCTCGCA GGCGAACCAG GGCGTGTTCC AGGCGATTCT GAAGCCCGGC
GACACCATCC TCGGCATGGA TCTCGCGTCC GGCGGTCACC TCACCCATGG TGCAGCGCCA
AACCAGTCCG GCAAATGGTT CAACGCGGTG CACTACGGCG TGCGCGAATC CGACTGCCTG
ATCGACTATG ATCAGGTTCA GGCACTTGCG ACCGAGCACC AGCCCAAGCT GATCATCGCC
GGCGGCTCCG CGATCCCGCG CCAGATCGAT TTTGCCAAGT TCCGTGAAAT CGCTGACAGC
GTCGGTGCCT ATCTGCTGGT GGACATGGCG CATTTCGCCG GTCTTGTTGC AGCAGGCGAG
CATCCTTCGC CCTTCCCGCA TGCTGATGTG GCCACCACCA CCACCCACAA GACCCTGCGC
GGCCCGCGTG GCGGCATGAT CCTGACCAAC AACCCGGATC TGGCAAAGAA ATTCAACTCT
GCCATCTTCC CGGGCATTCA GGGCGGCCCG CTGATGCACG TGATCGCAGG CAAAGCCGCC
GCCTTTGGCG AGGCGCTGAA GCCCGAGTTC AAATCCTACC AGAAACAAGT GCGTGCAAAC
GCGGTTGCGC TGGCGGATGA GCTGATCAAA GGCGGTCTGG ACATCGTGAC CGGCGGCACC
GACACCCATG TGATGCTGGT AGACCTGCGC CCCAAAGGCG TGACGGGCAA CATCGTCGAC
AAAGCGCTCG GCCGTGCGCA TATCACCACC AACAAGAACG GCATCCCGTT CGACCCGGAA
AAGCCCACCG TGACCTCCGG TATCCGCCTC GGCACGCCTG CAGGCACGAC CCGTGGGTTT
GGTGAGGAAG AGTTCCGCGA GATCGCCCGT CTGATCGTCG AGGTGGTCGA CGGTCTCGCA
GCCAATGGCG AGGACGGCAA CGCCGCGGTC GAAGAAGCCG TGCGTGGCAA AGTCGCGGCG
CTCTGCGGCC GCTTCCCGCT CTATCCAAAC CTCTGA
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| Protein sequence | MTDATRDPGF FTQSLSERDP ELFGAITDEL GRQRDEIELI ASENIVSAAV MEAQGSVLTN
KYAEGYPGRR YYGGCQYVDV AENLAIDRAK QLFNCEFANV QPNSGSQANQ GVFQAILKPG
DTILGMDLAS GGHLTHGAAP NQSGKWFNAV HYGVRESDCL IDYDQVQALA TEHQPKLIIA
GGSAIPRQID FAKFREIADS VGAYLLVDMA HFAGLVAAGE HPSPFPHADV ATTTTHKTLR
GPRGGMILTN NPDLAKKFNS AIFPGIQGGP LMHVIAGKAA AFGEALKPEF KSYQKQVRAN
AVALADELIK GGLDIVTGGT DTHVMLVDLR PKGVTGNIVD KALGRAHITT NKNGIPFDPE
KPTVTSGIRL GTPAGTTRGF GEEEFREIAR LIVEVVDGLA ANGEDGNAAV EEAVRGKVAA
LCGRFPLYPN L
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