| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1570 |
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| Symbol | |
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| ID | 4078379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1677559 |
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| End bp | 1678773 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638006883 |
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| Product | phosphopentomutase |
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| Protein accession | YP_613565 |
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| Protein GI | 99081411 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1015] Phosphopentomutase |
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| TIGRFAM ID | [TIGR01696] phosphopentomutase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGTG CCTTTCTGGT TGTATTGGAC TCGGTTGGTA TCGGCGGCGC GCCGGATGCC
GGGGCCTATT ACAACAAGGA TCTGCCCGAT CTCGGGGCCA ATACCGTCGC GCATATTGCA
CAGGCTTGTG CGGAGAAGCG CGCCGAGGAG GGGCGCCGGG GCGGGCTGCA TTTGCCAACG
CTTGATGCGA TGGGTCTGGG CGCGGCAGTG CGCCTTGCCT CCGGCCAGCC TGCGCCGGGT
CTTGATGCTG TGCCAGCCGG GCTTTGGGGC GCTGCGGTCG AGGTGAGCGC GGGCAAGGAC
ACTCCCTCAG GCCACTGGGA ACTTGCCGGC CTGCCAGTGC CATGGGACTG GGGCTATTTC
CCCGAGGAGG GGGCAGCCTT TGATGCGGAT CTGGTGGCGC ATGTGGCACA GGCCGCCGGG
GTCTCGGGAA TCTTGGGGAA CTGTCATGCT TCTGGCACCA GCATCATCGC GGAGCTTGGC
GCAGAACACC TGCGGACGGG GCTGCCGATC TGCTACACGT CGGCCGATAG CGTCTTTCAG
ATCGCTGCAC ATGAGGAGCA TTTTGGCCTT GAGCGCTTGC TCAAGCTTTG CGCCGATATC
GCGCCCTATC TGCATGCCCG CAGGGTGGGC CGCGTGATCG CGCGTCCATT CGTGGGCTCC
CCTGATGCAG GGTTTGAGCG CACCACCAAT CGGCGCGACT ATGCCATTAA ACCTCCGGCC
CCGATCCTGA CCGATTGGGT TCAGGCTGCC GGTGGACGTG TCCATGCCAT CGGCAAGATT
GGTGACATCT TCTCCATGCA AGGCATTGAT ACACTTGAGA AAGGCTCTGA TCAGGCTCTG
ATGCGCCATC TTGCCAATGC GGTGCAAAGC GCTGAAGACG GCAGCCTGAC CTTTGCAAAT
TTTGTCGAGT TTGACAGCCT TTATGGTCAC CGCCGAGATG TCGCGGGCTA TGCGCGGGCG
CTCGAGTGGT TCGATCGCGA GATTACCGGA ATCCTCGCGC AGTTGCGTCC GGGGGACCTG
ATGGTGCTGA CCGCAGACCA CGGCAACGAT CCAAGCTGGC CCGGGACCGA CCATACCCGC
GAACAGGTGC CGGTGCTTGT TGCAGGGGCG GGGTCGGGGT GCATCGGAAC CGTGGGGTTT
GTCGACATCG CCGCGTCGGT TGCAGCGCAT CTGGGGGTAC CCTCCGAGGG GCCGGGGCGC
AGCTTTTTGC CCTGA
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| Protein sequence | MARAFLVVLD SVGIGGAPDA GAYYNKDLPD LGANTVAHIA QACAEKRAEE GRRGGLHLPT
LDAMGLGAAV RLASGQPAPG LDAVPAGLWG AAVEVSAGKD TPSGHWELAG LPVPWDWGYF
PEEGAAFDAD LVAHVAQAAG VSGILGNCHA SGTSIIAELG AEHLRTGLPI CYTSADSVFQ
IAAHEEHFGL ERLLKLCADI APYLHARRVG RVIARPFVGS PDAGFERTTN RRDYAIKPPA
PILTDWVQAA GGRVHAIGKI GDIFSMQGID TLEKGSDQAL MRHLANAVQS AEDGSLTFAN
FVEFDSLYGH RRDVAGYARA LEWFDREITG ILAQLRPGDL MVLTADHGND PSWPGTDHTR
EQVPVLVAGA GSGCIGTVGF VDIAASVAAH LGVPSEGPGR SFLP
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