Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1554 |
Symbol | |
ID | 4075852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1660504 |
End bp | 1660872 |
Gene Length | 369 bp |
Protein Length | 122 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 638006867 |
Product | MerR family transcriptional regulator |
Protein accession | YP_613549 |
Protein GI | 99081395 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.890777 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAA CAAAACTGTC ATTCAAGGAG ATGTGCGCCG AGTTCGATGT GACACCGCGC ACCCTTCGGT ACTATGAATA TATCGAGCTG TTGCAGCCCG AACGTCAGGG CCGCTCGCGG TTCTACGGCG CGCGCGACGT GGCGCGGATG AAGCTGATCC TGCGCGGGCG CAAGTTCGGC TTTCAGCTCG AAGAGATCCG GCAATGGTTG CTGATCTACG ACAAGGAAGG CGACGAAGCG CAAAACCGCG CCTTTATCGA GATGGCCGAC CGGCAACTCA AGGAGCTGGA ACTCCAGCGC CAGCAGATCA ACGAGGCGAT GGACGAACTC ACTGATCTGC GCAAGGTGAC GCTCGGTTTA TTGAAGTAG
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Protein sequence | MTETKLSFKE MCAEFDVTPR TLRYYEYIEL LQPERQGRSR FYGARDVARM KLILRGRKFG FQLEEIRQWL LIYDKEGDEA QNRAFIEMAD RQLKELELQR QQINEAMDEL TDLRKVTLGL LK
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