Gene TM1040_1554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1554 
Symbol 
ID4075852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1660504 
End bp1660872 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content57% 
IMG OID638006867 
ProductMerR family transcriptional regulator 
Protein accessionYP_613549 
Protein GI99081395 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.890777 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAA CAAAACTGTC ATTCAAGGAG ATGTGCGCCG AGTTCGATGT GACACCGCGC 
ACCCTTCGGT ACTATGAATA TATCGAGCTG TTGCAGCCCG AACGTCAGGG CCGCTCGCGG
TTCTACGGCG CGCGCGACGT GGCGCGGATG AAGCTGATCC TGCGCGGGCG CAAGTTCGGC
TTTCAGCTCG AAGAGATCCG GCAATGGTTG CTGATCTACG ACAAGGAAGG CGACGAAGCG
CAAAACCGCG CCTTTATCGA GATGGCCGAC CGGCAACTCA AGGAGCTGGA ACTCCAGCGC
CAGCAGATCA ACGAGGCGAT GGACGAACTC ACTGATCTGC GCAAGGTGAC GCTCGGTTTA
TTGAAGTAG
 
Protein sequence
MTETKLSFKE MCAEFDVTPR TLRYYEYIEL LQPERQGRSR FYGARDVARM KLILRGRKFG 
FQLEEIRQWL LIYDKEGDEA QNRAFIEMAD RQLKELELQR QQINEAMDEL TDLRKVTLGL
LK