| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1553 |
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| Symbol | |
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| ID | 4075851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1659956 |
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| End bp | 1660378 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638006866 |
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| Product | phenylacetic acid degradation-related protein |
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| Protein accession | YP_613548 |
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| Protein GI | 99081394 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.639423 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGAAA AAACGCAGCT GGCGCGCCAG TTTATCGAGG CGATCCCGCA TTCCAAGGCG
CTTGGTATGG AGCTGACCGA AATCGGAGAT GGGCGCGCGG TGATCGTGAT GCCCTATGAC
AAGAAACTCG TTGGGGACCC CGAGACAGGT GTGATCCACG GAGGCGCTGT GTCGGCGCTG
ATGGACACCT GCTGCGGCGC GGCCGTGATG AGCCACCCGA GCCAGCCGTC GAGCACCGCG
ACCATTGATT TGCGCATTGA CTACATGCGC GGTGCAACGC CGGGACAGAC CATCACCACC
ACCGCCACCT GTCATCACGT GACGCGCAAC GTGGCCTTCG TGCGCGCAGT TGCAACCGAT
GACGAAACAG AAGTGCCCGT TGCAACCGCC TCCGGGGCCT TCACGCTGGA GCCAAAACGA
TGA
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| Protein sequence | MAEKTQLARQ FIEAIPHSKA LGMELTEIGD GRAVIVMPYD KKLVGDPETG VIHGGAVSAL
MDTCCGAAVM SHPSQPSSTA TIDLRIDYMR GATPGQTITT TATCHHVTRN VAFVRAVATD
DETEVPVATA SGAFTLEPKR
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