| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1528 |
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| Symbol | |
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| ID | 4075826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1631689 |
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| End bp | 1632696 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006841 |
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| Product | transcriptional regulator |
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| Protein accession | YP_613523 |
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| Protein GI | 99081369 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.755279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.310325 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGACG ATAGTTTTGT TCAAAAAGGC GCCGCCGCAA CACTCAAGGT GCCGCATGCA
GGCGCGCCGC AGGACTTCTA TTTCCTGCTG CTGCCAAAGG CCACGATGCT GCCTGTCGCC
GCCGCGATCG AGCCGCTCAG AATTGCAAAT CAGGTCACAA ATACAAAGCT TTATCGCTGG
TATATCATGA CACAGGATGG CGCGCCGCTA CGCTGCTCCA ACGGGATGGT TGTCACCCCC
GATCTGCCGC TGGCCCCGCT GCCCTCGGAT GCCATGGGCT TTGTGTGTTC AGGCGTGGAG
CCCCAGGAGG CCGCCGGTGA CATCACTCTG AACTGGCTGC GGCGCGAACA TCGCTTCGGG
CGCAAGCTCG GGGGGATCTG TACCGGTGCA TTTGCGCTGG CGCAGGCGGG GCTGATCAAG
GATCAACCCT TCACGCTGCA CTGGGAAAAC CAACCCGGTT TTGTCGAGCG ATACGAGCAC
CTGAAACCCT CGCCTAACAT TTACGAGATT TCTGGAAATT TGATGACCTG TGGCGGCGGC
AGCGCGGCAA CGGACATGAT GCTGACCCTG ATCGAGCAGC GCCATGGCAA GCAGCTGGCG
ATCATCGTCG CGGATATGTG CCTGCATGTG CGCTCCACCT CCGGGGCTGC ACCTCAGAAA
TCCAACTATG CCGTCGCCAT CGGCAGTCGC AACCAGCGCC TTCTGAGTGC TCTGCAACTG
ATGCAGGAAT CGATCGAAGA GCCGCTCTCT ATCGGAACAC TTTGCGCGCG GCTGGATATT
TCCCGTCGCC AATTGGAGCG CCTGTTCTCG CGCTATCTCG ATCAAAGCCC GATGCACGTC
TATTCCGACA TGCGCCTGAG CCATGCCTTC GCCTTGATGA ATGAAACCTC GATGTCGGTG
ACAGAGATTG CGCTTGCCTC CGGGTTCAAC TCCGCCACGC ATTTCTCTCG GCAATTCAAA
CGCAAATTCG GCGCCAGCCC GCATTTCTTC CGCAAGGGCT GGGCCTGA
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| Protein sequence | MSDDSFVQKG AAATLKVPHA GAPQDFYFLL LPKATMLPVA AAIEPLRIAN QVTNTKLYRW
YIMTQDGAPL RCSNGMVVTP DLPLAPLPSD AMGFVCSGVE PQEAAGDITL NWLRREHRFG
RKLGGICTGA FALAQAGLIK DQPFTLHWEN QPGFVERYEH LKPSPNIYEI SGNLMTCGGG
SAATDMMLTL IEQRHGKQLA IIVADMCLHV RSTSGAAPQK SNYAVAIGSR NQRLLSALQL
MQESIEEPLS IGTLCARLDI SRRQLERLFS RYLDQSPMHV YSDMRLSHAF ALMNETSMSV
TEIALASGFN SATHFSRQFK RKFGASPHFF RKGWA
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