| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1527 |
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| Symbol | clpP |
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| ID | 4075825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1630761 |
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| End bp | 1631417 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638006840 |
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| Product | ATP-dependent Clp protease proteolytic subunit |
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| Protein accession | YP_613522 |
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| Protein GI | 99081368 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.73019 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.314697 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCCCAA GACAGGCAGG TCCAATGATT GATCCAACAG AAACATACAT GAACACACTT
GTGCCGATGG TCGTTGAGCA GACCAGCCGG GGCGAGCGCG CATATGACAT TTTCTCGCGC
CTGTTGAAGG AGCGTATCAT CTTCCTCAAC GGTCCCGTTC ACGATGGCAT GTCTTCGCTG
ATCGTAGCGC AGCTGTTGCA CCTTGAGGCG GAAAACCCCT CGAAAGAGAT TTCGATGTAC
ATCAACTCGC CGGGTGGTGT GGTGACGTCG GGCCTGTCGA TCTATGACAC GATGCAGTAC
ATCAAGCCCA AGGTGTCGAC GCTGGTGATC GGCCAGGCGG CCTCCATGGG CTCCTTGCTG
CTGACCGCGG GCGAGGCTGG CATGCGCTTC TCGCTGCCCA ATTCGCGCGT GATGGTCCAC
CAGCCCTCCG GCGGGTATCA GGGGCAGGCG ACGGACATCA TGATCCACGC CGAAGAGACC
CTGAAGCTCA AGCGTCGCTT GAACGAGATC TACGTCAAAC ACACCGGTCA GGACTACGAC
ACCATTGAAA AGGCGCTGGA ACGGGACAAC TTCATGTCAC CGGAACAAGC CAAGGAATTC
GGACTGATCG ACGAAATCGT CGAAAATCGC AGCAAGGCCG ACGACGCAGA AAGCTAA
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| Protein sequence | MIPRQAGPMI DPTETYMNTL VPMVVEQTSR GERAYDIFSR LLKERIIFLN GPVHDGMSSL
IVAQLLHLEA ENPSKEISMY INSPGGVVTS GLSIYDTMQY IKPKVSTLVI GQAASMGSLL
LTAGEAGMRF SLPNSRVMVH QPSGGYQGQA TDIMIHAEET LKLKRRLNEI YVKHTGQDYD
TIEKALERDN FMSPEQAKEF GLIDEIVENR SKADDAES
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