| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1526 |
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| Symbol | clpX |
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| ID | 4075824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1629344 |
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| End bp | 1630609 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638006839 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_613521 |
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| Protein GI | 99081367 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.86122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.530308 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACGA ACTCGAGCGG CGACAGCAAG AACACGCTTT ACTGTAGCTT CTGCGGCAAG
AGCCAGCATG AGGTGAGAAA GCTGATTGCA GGCCCGACCG TGTTCATCTG TGATGAATGC
GTTGAGCTGT GCATGGACAT CATCCGCGAG GAGACGAAGG CCTCCGGGAT GAAAGCAACC
GACGGCGTGC CGACGCCCAA GGATATTTGC GAGGTCCTCG ATGATTACGT GATCGGTCAG
GCGACGGCAA AGCGTGTGCT GTCGGTGGCG GTTCACAACC ACTACAAGCG TCTGAACCAC
GCCCAGAAGG CCGGCAATGA TATTGAACTT TCAAAGTCCA ACATCCTGCT GATCGGCCCC
ACCGGCTGCG GTAAGACCCT TCTGGCGCAA ACTCTTGCAC GGATTCTGGA CGTGCCGTTT
ACCATGGCAG ATGCCACTAC GCTTACAGAG GCAGGCTATG TTGGTGAGGA TGTCGAGAAC
ATCATTCTGA AACTGCTGCA GGCGTCTGAA TACAATGTCG AACGCGCGCA GCGCGGTATC
GTCTACATCG ACGAGGTCGA CAAGATCACC CGCAAGTCTG AAAACCCCTC CATCACCCGT
GATGTGTCGG GCGAGGGCGT GCAGCAGGCT CTGCTGAAAC TGATGGAAGG CACTGTGGCC
TCCGTGCCGC CGCAGGGTGG GCGCAAGCAT CCCCAGCAGG AGTTCCTGCA GGTGGATACC
ACGAACATCC TCTTCATCTG CGGCGGTGCC TTTGCGGGCC TGGACAAGAT CATCAAGCAG
CGCGGCAAAG GCTCTGCGAT GGGCTTTGGT GCCGATGTGC GCGAAGAGAG CGATGCGGGC
GTGGGCGAGA CCTTCCGCGA TCTCGAGCCC GAAGATCTGC TGAAATTCGG CCTGATCCCG
GAATTCGTGG GCCGTTTGCC GGTTCTCGCG ACGCTTGAGG ATCTGGATGA GGATGCGCTG
ATCACCATCT TGACCAAGCC CAAGAATGCT TTGGTCAAAC AATACCAGCG CCTCTTTGAA
CTTGAAGACA CCGAGCTGGA CTTCACCGAT GAGGCGCTCT CGGCCATTGC CAAGAAAGCC
ATTGAGCGCA AGACCGGCGC GCGGGGTCTG CGCTCCATCC TCGAGGATAT CCTGCTCGAT
ACCATGTTCG AGCTGCCCGG AATGGAGAGC GTGACAAAAG TGGTCGTCAA TGAGGAGGCC
GTCTGCTCTG AGGCGCAGCC GCTGATGATC CACGCCGATG AAAAGGAATC GGCCACCGCA
GGTTGA
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| Protein sequence | MATNSSGDSK NTLYCSFCGK SQHEVRKLIA GPTVFICDEC VELCMDIIRE ETKASGMKAT
DGVPTPKDIC EVLDDYVIGQ ATAKRVLSVA VHNHYKRLNH AQKAGNDIEL SKSNILLIGP
TGCGKTLLAQ TLARILDVPF TMADATTLTE AGYVGEDVEN IILKLLQASE YNVERAQRGI
VYIDEVDKIT RKSENPSITR DVSGEGVQQA LLKLMEGTVA SVPPQGGRKH PQQEFLQVDT
TNILFICGGA FAGLDKIIKQ RGKGSAMGFG ADVREESDAG VGETFRDLEP EDLLKFGLIP
EFVGRLPVLA TLEDLDEDAL ITILTKPKNA LVKQYQRLFE LEDTELDFTD EALSAIAKKA
IERKTGARGL RSILEDILLD TMFELPGMES VTKVVVNEEA VCSEAQPLMI HADEKESATA
G
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