Gene TM1040_1519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1519 
Symbolaat 
ID4077075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1625590 
End bp1626222 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content59% 
IMG OID638006832 
Productleucyl/phenylalanyl-tRNA--protein transferase 
Protein accessionYP_613514 
Protein GI99081360 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2360] Leu/Phe-tRNA-protein transferase 
TIGRFAM ID[TIGR00667] leucyl/phenylalanyl-tRNA--protein transferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.199726 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.641907 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCA GCGCTGATCT CCTGCTTCAT GCTTACGCGA ACGGCGTCTT CCCCATGGCG 
GAGAGCCGCG ACGATCCAGA GGTGTTCTGG GTCGATCCAA AGCGCCGTGG CATTCTGCCT
TTGGACGGTT TTCGGATTTC TCGTTCTCTG GCCAAACGCC TTCGCCGCGA TGATTACAGC
ATCAGCGTAA ACCGCGATTT TGCGGGCGTG GTGCAGGGGT GTGCCGATCG CGAAGAGACC
TGGATCAACG GTGAAATCTT TGACCGTTAC CAAGAGCTGC ATCACGACGG ATTTGCTCAC
TCTCTCGAAG TCTGGATGGA CGATGCGCTG GTGGGGGGCG TCTACGGCGT CTCACTTGGG
GGCGCCTTTT TTGGCGAAAG CATGTTCTCG CGCCGGCGAG ATGCCTCCAA GATTGCACTC
GCCTATCTCG TGGATCGTCT GAACGCAGGC GGCTACATTC TATGTGACAC CCAGTTCATC
ACGCCTCATC TGGCGTCTCT TGGGGGGCGG GAAATCAGCC GCGCGGCTTA TCGCAGAAGG
CTCGCCGAGG CGCTGGACCA GCCGGGAGAT TTCATCTCTC CCGCGCTCCC GTCACCTCAG
GTGCTCTTGC AGCGCAGAAC CCAGACGTCG TAA
 
Protein sequence
MTLSADLLLH AYANGVFPMA ESRDDPEVFW VDPKRRGILP LDGFRISRSL AKRLRRDDYS 
ISVNRDFAGV VQGCADREET WINGEIFDRY QELHHDGFAH SLEVWMDDAL VGGVYGVSLG
GAFFGESMFS RRRDASKIAL AYLVDRLNAG GYILCDTQFI TPHLASLGGR EISRAAYRRR
LAEALDQPGD FISPALPSPQ VLLQRRTQTS