Gene TM1040_1517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1517 
Symbol 
ID4077073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1623674 
End bp1624165 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content64% 
IMG OID638006830 
Productbiotin carboxyl carrier protein 
Protein accessionYP_613512 
Protein GI99081358 
COG category[I] Lipid transport and metabolism 
COG ID[COG0511] Biotin carboxyl carrier protein 
TIGRFAM ID[TIGR00531] acetyl-CoA carboxylase, biotin carboxyl carrier protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0258999 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.919336 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAATA AATCTCACGA AGCAGATGTG GCGTTCATCA AGGCTCTGGC GGAGCTTTTG 
CGCGAAAACG ACCTGACCGA GCTTCAGGTC AAGCGCGACT ACGCGGAAGA TGACAGCCTG
AATGTGCGCG TCTCCCGCCA GCACCCCGCT CCCGCCGCGC CGGTTCACGT CGCAGCAGCC
CCCGCGCCTG CCCCGGCCGC CGCAGCGCCC GCCGCTGTCG CAGCCGCAGC GCCCGCATCC
GACGATCCTG CCAATCACCC CGGCGCTGTG ACCTCCCCGA TGGTGGGCAC CGCCTATCTC
GCACCCGAGC CGGGCGCTTC TGCCTTTGTG TCCGTGGGTC AGCAAGTGAG CGAAGGCGAC
ACCCTGTTGA TCGTCGAAGC AATGAAGACC ATGAACCATA TCCCGGCCCC CAAATCGGGC
ACCGTGAAGC GCATCCTTGT TGAAGATGGC GCCGCGGTCG AGTTTGGTCA TCCGCTCGTC
ATCGTCGAGT AA
 
Protein sequence
MTNKSHEADV AFIKALAELL RENDLTELQV KRDYAEDDSL NVRVSRQHPA PAAPVHVAAA 
PAPAPAAAAP AAVAAAAPAS DDPANHPGAV TSPMVGTAYL APEPGASAFV SVGQQVSEGD
TLLIVEAMKT MNHIPAPKSG TVKRILVEDG AAVEFGHPLV IVE