Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1517 |
Symbol | |
ID | 4077073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1623674 |
End bp | 1624165 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638006830 |
Product | biotin carboxyl carrier protein |
Protein accession | YP_613512 |
Protein GI | 99081358 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0511] Biotin carboxyl carrier protein |
TIGRFAM ID | [TIGR00531] acetyl-CoA carboxylase, biotin carboxyl carrier protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0258999 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.919336 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAAATA AATCTCACGA AGCAGATGTG GCGTTCATCA AGGCTCTGGC GGAGCTTTTG CGCGAAAACG ACCTGACCGA GCTTCAGGTC AAGCGCGACT ACGCGGAAGA TGACAGCCTG AATGTGCGCG TCTCCCGCCA GCACCCCGCT CCCGCCGCGC CGGTTCACGT CGCAGCAGCC CCCGCGCCTG CCCCGGCCGC CGCAGCGCCC GCCGCTGTCG CAGCCGCAGC GCCCGCATCC GACGATCCTG CCAATCACCC CGGCGCTGTG ACCTCCCCGA TGGTGGGCAC CGCCTATCTC GCACCCGAGC CGGGCGCTTC TGCCTTTGTG TCCGTGGGTC AGCAAGTGAG CGAAGGCGAC ACCCTGTTGA TCGTCGAAGC AATGAAGACC ATGAACCATA TCCCGGCCCC CAAATCGGGC ACCGTGAAGC GCATCCTTGT TGAAGATGGC GCCGCGGTCG AGTTTGGTCA TCCGCTCGTC ATCGTCGAGT AA
|
Protein sequence | MTNKSHEADV AFIKALAELL RENDLTELQV KRDYAEDDSL NVRVSRQHPA PAAPVHVAAA PAPAPAAAAP AAVAAAAPAS DDPANHPGAV TSPMVGTAYL APEPGASAFV SVGQQVSEGD TLLIVEAMKT MNHIPAPKSG TVKRILVEDG AAVEFGHPLV IVE
|
| |