| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1513 |
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| Symbol | |
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| ID | 4077069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1620001 |
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| End bp | 1621200 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638006826 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_613508 |
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| Protein GI | 99081354 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.395595 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.69839 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAAC TGGAAAAAAC CGATCTCAAA CTTCTCATGA TCGTGGCTGT TCTGACCATG
TTCGCCCCGT TCATCCTGAA CCCCTTCCCC GTCGACAGCG CCATGGCGCA GTTCAACGCG
GGCTATCCGG ACCTGATGCA GCGCTTTGTG ATCTTTGGTG TCTTTGCCAT CGGGTTCAAC
ATCCTCTTTG GCCTCACCGG CTACCTCTCC TTTGGTCACG CGGCCTTTCT CGGGGTGGGG
TCCTATGCGG CCGTCTGGAT GTTCAAACTG CTGAGCATGA ACGTGCTGCC CGCCATCGTG
CTGTCGGTTC TGGTCTCCGG TCTCTTTTCG CTGGTGATTG GCTTTGTGAG CCTGCGGCGC
TCGGGGATCT ACTTCTCCAT TCTGACTCTG GCCTTTGCCC AGATGATGTT TGCGCTGGCC
TATTCGGTTC TGACCCCGAT CACGGGCGGT GAAACGGGCC TGCAGTTGGC GCTGGATGAT
CCGCGCATTC TCGGCGCCAG CCAGACCGCC GAGGGCAATA TCCCGGTCCC GAGCCTCTTT
GGGCTGGAGA TGCGCGACAG TGCAGAACTG GTGATCGGCG GCTGGTCCTT TACCTTCAAC
TTTGGCTACT ACTTCTGCGC GCTGGTGATG CTTGCATCGT TCTATCTCGC GATCCGCATC
TTCCGCTCGC CCTTTGGGAT GATGCTGCGG GCGGTGAAAT CCAACCAGCA GCGGATGAAC
TACACTGGTC TCAACTCCCG TCCCTATATG CTTGCGGCCT TTGTGATCTC TGGCATGTAC
GCGGGGCTCG CCGGTGGTCT CATGGCCTCC ATGGACCCGC TGGCTGGCGC GGAGCGGATG
CAGTGGACCG CATCGGGCGA AGTCGTTCTG ATGACCATCC TTGGTGGGGC TGGCACGCTG
ATCGGTCCGG TTCTGGGCGC AGGCTTCATC AAATACTTCG AGAACATCTT CTCCAAGATC
AACGACAACG TGCTGCACAG CTGGTTCAGC TTCCTGCCGG ATGGGCTTGA GGACTTTGTG
GTTTTCATCA TCCACCCCTT TATCGGCAAG GGCTGGCATC TGACGCTTGG CATCCTCTTC
ATGCTGGTGG TGATCTACCT CCCCGGCGGA CTTGTGGAAG GCGGACAGCG GGTCGGAAAC
TGGCTCAAGG GGCGCAAGAA GTCTGACGCC AAGCAGAGCA ACACCAATCC GGCGGAATAA
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| Protein sequence | MFKLEKTDLK LLMIVAVLTM FAPFILNPFP VDSAMAQFNA GYPDLMQRFV IFGVFAIGFN
ILFGLTGYLS FGHAAFLGVG SYAAVWMFKL LSMNVLPAIV LSVLVSGLFS LVIGFVSLRR
SGIYFSILTL AFAQMMFALA YSVLTPITGG ETGLQLALDD PRILGASQTA EGNIPVPSLF
GLEMRDSAEL VIGGWSFTFN FGYYFCALVM LASFYLAIRI FRSPFGMMLR AVKSNQQRMN
YTGLNSRPYM LAAFVISGMY AGLAGGLMAS MDPLAGAERM QWTASGEVVL MTILGGAGTL
IGPVLGAGFI KYFENIFSKI NDNVLHSWFS FLPDGLEDFV VFIIHPFIGK GWHLTLGILF
MLVVIYLPGG LVEGGQRVGN WLKGRKKSDA KQSNTNPAE
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