Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1510 |
Symbol | |
ID | 4077066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 1615849 |
End bp | 1617180 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638006823 |
Product | XRE family transcriptional regulator |
Protein accession | YP_613505 |
Protein GI | 99081351 |
COG category | [R] General function prediction only |
COG ID | [COG3800] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.899196 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGGAG ACAGTCTGAC AGGCAGCCGC ATCCGCGAGA GGCGCATGAT GCTGGGGTTG CGCCAGGCCG ATCTGGCCCG TGATGCGGGC ATCTCGGCCT CTTACCTCAA TCTCATCGAG CACAACCGCC GCAGAATCGG CGGCAAACTC CTTGTGACCT TGGCGCAGGT GCTTGGCGTC GAGCCTTCTC TTTTGACCGA AGGGGTCGAG GCGACGCTTG TGGCGTCCCT GCGCGAGGCT GCGGCAGAAG CGCGCACGCC GATGGTCGAA CTCGATCGGG TGGACGAGTT TGCAGGCCGT TTTCCCGGTT GGGCCGAGGT GCTGGCACAA ACCCATGGTC GCATCGGCGC GCTGGAGCGT ACCGTTCGGT CGCTCTCGGA TCGCCTCACC CATGACCCGC ACCTTGCCGC CTCGCTCCAT GAGGTGCTTT CAACAGCCGC TGCGATCCGG TCCACGGCGG GCATTCTCGC AGAGCCCGGA GAGCTCGAAG CAGAATGGCG TGACCGGTTT CACAAGAACC TCGATCAGGA TGCGCAGCGT TTGGCGGACA GCAGCCGCGC GCTGGTCCGG TTTCTGGATG AAAGCGATCA GGACGGCGAG CGGCGCGGCA TCCCGCAAGA GGAAGTGGAG GCGTTTCTCG TCGCTCGCGA GTTCCATTTC CCCGAACTAG AAGAGGGCAC CGCAAGCCCG CGCGAGCTTG TGCAATCGGT GAGCGAGCTT GAAAGCACCG CTGCCCGCAA GCTTGCCGAG GCGGCCTTGG AGGTCTACCG CGAGGACGCC GAACGCATGC CGATGGCCGC GCTGACGGCC GCCATTGCGC GACACGGTCT GGTGCCGGGC AAACTGGCAC AGGCGTTGGA TGTGGAAATC TATCGCCTCT TGCGCCGCCT TGCGATGATG CCAGAGGATG TTCTGGGGGT GTCAGTCGGG CTGGTGATCT GCGACGCCTC CGGTTCGATC TTGCTGCGCA AGCCCGTCGC GGGGTTTCCT CTGCCGCGCT TTGGCGCTTC CTGTCCGCTC TGGCCGCTGT TCACCGCGCT TTCGCAACCG GGGGTGCCGA TCCAGCGAAA CGTGCATCAA GAGGGGCGCG CGGCGCGCGA CAGCACCTGT TTCGCGATTT CCTGGCAGGC CGAGCCTTCG GACTTTGACC GCGACCCCGT CCTGCGCTCG GTGATGCTGA TCCTGCCGTC TGAGCAGCCA GACCAGCCCC CCGCATCAGG CTCGCGCCCG GTAGGGGCGA GCTGCAGGAT CTGCGCGCGG CGCGGATGCG CAGCAAGGCG CGAGCCGTCG ATTTTACGCG ATGCGAGAGG CGCCAGGTTA ACGCAACTCT AA
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Protein sequence | MPGDSLTGSR IRERRMMLGL RQADLARDAG ISASYLNLIE HNRRRIGGKL LVTLAQVLGV EPSLLTEGVE ATLVASLREA AAEARTPMVE LDRVDEFAGR FPGWAEVLAQ THGRIGALER TVRSLSDRLT HDPHLAASLH EVLSTAAAIR STAGILAEPG ELEAEWRDRF HKNLDQDAQR LADSSRALVR FLDESDQDGE RRGIPQEEVE AFLVAREFHF PELEEGTASP RELVQSVSEL ESTAARKLAE AALEVYREDA ERMPMAALTA AIARHGLVPG KLAQALDVEI YRLLRRLAMM PEDVLGVSVG LVICDASGSI LLRKPVAGFP LPRFGASCPL WPLFTALSQP GVPIQRNVHQ EGRAARDSTC FAISWQAEPS DFDRDPVLRS VMLILPSEQP DQPPASGSRP VGASCRICAR RGCAARREPS ILRDARGARL TQL
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