| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1500 |
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| Symbol | |
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| ID | 4077056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1606078 |
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| End bp | 1607382 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006813 |
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| Product | dihydropyrimidine dehydrogenase |
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| Protein accession | YP_613495 |
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| Protein GI | 99081341 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0167] Dihydroorotate dehydrogenase |
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| TIGRFAM ID | [TIGR01037] dihydroorotate dehydrogenase (subfamily 1) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.190066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGATC TTACAACAGA ATTCCTCGGT ATCAAATCGC CGAATCCTTT CTGGCTGGCC
TCCGCGCCGC CCACCGACAA AGAATATAAC GTGCGCCGCG CCTTTGAGGC GGGCTGGGGC
GGTGTGGTCT GGAAGACCCT CGGCGCCGAA GGGCCACCGG TTGTCAACGT GAACGGGCCG
CGGTATGGCG CGATCTGGGG GGCGGACCGC CGTCTTCTGG GGCTCAACAA CATCGAACTG
ATCACGGATC GCCCGCTGGA TGTGAACCTC GAGGAGATGA CCCGCGTCAA AAAGGACTAC
CCGGATCGCG CGCTGATTGC GTCGATCATG GTGCCCTGTG AAGAGGCGGC TTGGAAAGCG
ATCCTGCCGC GTGTGGCGGA AACAGGATGT GACGGGATCG AGCTCAACTT TGGCTGCCCG
CATGGGATGG CCGAGCGCGG CATGGGTTCT GCTGTGGGGC AGGTTCCGGA ATACATTCAG
ATGGTCACCG AATGGTGCAA ACAGTATTAT GACAAGCCGG TGATCGTGAA GCTCACGCCC
AATATCACCG ACATTCGTCA TCCGGCGCGG GCCGCGAAGG CCGGCAATGC CGATGCTGTG
TCTCTGATCA ACACCATCAA TTCGATCACC TCGGTCAACC TTGATGCAAT GTCGCCCGAA
CCGATGATTG GCGGCAAGGG CACCCATGGC GGCTATTGCG GCCCGGCGGT GAAACCGATC
GCCATGAATA TGGTGGCCGA AATTTCCCGC GATCCGCAAA CCGCAGGTCT GCCTATTTCC
GCCATTGGCG GCGTGACAAC ATGGCGCGAT GCGGCGGAGT TCATCGCTCT TGGGGCTGGC
AATGTGCAGG TTTGCACGGC GGCCATGACC TATGGGTTCA AGGTCGTTGA AGAGATGATT
TCGGGCCTGT CGGATTGGAT GGACGAGAAG GGCTATTCCT CGATCGAGGA CTTCCGTGGC
ATGGCGGTTC CGAATGTGAC CGACTGGCAG TATCTGGACC TCAACTATGT GACCAAGGCC
AAGATCTCTC AGGATGACTG CATCAAATGC GGACGTTGCT ATGCGGCCTG CGAGGATACC
TCGCATCAGG CGATTGAGAT GTCGGCGGAT CGGACCTTTA CCGTGAAGGA CGACGAATGC
GTGGCGTGTA ACCTGTGCGT CAACGTCTGT CCGGTTGAAG GCTGTATCAC CATGGAAGAG
GTTGCCGTGG GCGCCATTGA TGAACGCACC GGCAAGGTGG TGAGCGGCGA ATATGGCAAC
TGGACCCAGC ACCCTAATAA TCCGTCTGCA ACGGCTGCGG AATAA
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| Protein sequence | MADLTTEFLG IKSPNPFWLA SAPPTDKEYN VRRAFEAGWG GVVWKTLGAE GPPVVNVNGP
RYGAIWGADR RLLGLNNIEL ITDRPLDVNL EEMTRVKKDY PDRALIASIM VPCEEAAWKA
ILPRVAETGC DGIELNFGCP HGMAERGMGS AVGQVPEYIQ MVTEWCKQYY DKPVIVKLTP
NITDIRHPAR AAKAGNADAV SLINTINSIT SVNLDAMSPE PMIGGKGTHG GYCGPAVKPI
AMNMVAEISR DPQTAGLPIS AIGGVTTWRD AAEFIALGAG NVQVCTAAMT YGFKVVEEMI
SGLSDWMDEK GYSSIEDFRG MAVPNVTDWQ YLDLNYVTKA KISQDDCIKC GRCYAACEDT
SHQAIEMSAD RTFTVKDDEC VACNLCVNVC PVEGCITMEE VAVGAIDERT GKVVSGEYGN
WTQHPNNPSA TAAE
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