| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1487 |
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| Symbol | |
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| ID | 4077043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1588830 |
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| End bp | 1590218 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638006800 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_613482 |
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| Protein GI | 99081328 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTTTA AGAAGTCCAA AACCGCTGCG TCCTCCAGCC TGAATGACGA TCAGAAGCTG
CGCGCGATGA TCGAAAACAC CCAGGCCGTC ATCGAGTTCA AGGTCGATGG GACCATCATT
CGCGCAAACA AGGTCTTTTT GGACACGCTG GGCTACACGC TTGAGGAAAT CGAGGGCCAA
CACCACAGCA TGTTTGTCTA TCCGAGTTTT GTGAGAAAAG ACGCCTACAA GCAGATGTGG
CGCGATCTGG CTGCGGGCAA TCCGCTGACG GATCAGTTTC CGAGGCTGCG CAAGGACGGA
GAAGTTGTTT GGATTCAAGC AACCTACGCG CCGTTCTTCA ATGAAGATGG GACCGTCGAC
CGGATCGTGA AAATCGCGTC CAACATCACC AAGCGCCGAA TGGAAATTCT TGGAATTGCC
GCCGCGCTGG AACAACTGAG AAACGGTGAT TTGACCTATC GATGCGCCCC CTCCGACATC
GATGACATCG GGCGTCTCTC CACAGCCTAT AACGAGGCTG TCAGCTCTCT GCAAAACACC
ATTCGCACGG TGCGCGAAGT GGCAGATGGC GTCACACGCA CGGCGGGTCA GTTGAATGAC
TCCTCCTCTG AACTGTCGCA ACGCACGGAA AATCAGGCGG CGACACTGGA GGAAACAGCC
GCCGCAGTCG AGGAGTTGAC AGCAACCGTC CGCTCTTCGG CGGATGGCGC ACGCGAAGTC
GAGGACAATG TTCGCCAGGC CCGCGTGACC GCTGAGAAAA GCGGCCAGGT CGTCAGTGAC
GCTGTAAAAG CAATGTCCAA GATCGAAGAA TCCTCGCAAA GCATTTCAAA GATCATCTCC
GTGATCGACG ACATCGCCTT TCAGACCAAC CTGCTGGCCT TGAACGCTGG CGTCGAAGCT
GCGCGCGCAG GCGAAGCGGG GCGCGGATTT GCCGTGGTTG CCTCCGAGGT CCGAAATCTA
GCGCTTCGCT CTGCGGATGC CGCTGGTGAA ATCAAAGGCT TGATCGATCA AAGCGCCACC
CATGTCTCTG ACGGCGTGAC CCTGGTGGGC CGCACCGGCA CAGAACTCGA GGCGATCATC
AGCAGCGTGA ACTCGATTTC TGAGAACGTC AGCGTCATCG CACGCGGAGC CGAGGAACAA
GCCGTAACGC TCAGCGAAAT CAACAGCGGC ATCGGTCATC TTGATGAGGT GACACAAAAC
AACGTCGCTA TGGTGGAAGA GACCACTGGC GCAAGCCAGA CCCTCGCCAG CGATGCCTCG
GTGATGTCGA AAGAGATCGC GAATTTTGTA TCCGAGGGCG AAATCAAGAT CGCAAAACAT
GTCGCGCCGA TCCCGAACAC GCCGCCGCCA ACCGTGGAAC CTGAACTGGA ACTGCGCACC
GGCACCTAG
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| Protein sequence | MLFKKSKTAA SSSLNDDQKL RAMIENTQAV IEFKVDGTII RANKVFLDTL GYTLEEIEGQ
HHSMFVYPSF VRKDAYKQMW RDLAAGNPLT DQFPRLRKDG EVVWIQATYA PFFNEDGTVD
RIVKIASNIT KRRMEILGIA AALEQLRNGD LTYRCAPSDI DDIGRLSTAY NEAVSSLQNT
IRTVREVADG VTRTAGQLND SSSELSQRTE NQAATLEETA AAVEELTATV RSSADGAREV
EDNVRQARVT AEKSGQVVSD AVKAMSKIEE SSQSISKIIS VIDDIAFQTN LLALNAGVEA
ARAGEAGRGF AVVASEVRNL ALRSADAAGE IKGLIDQSAT HVSDGVTLVG RTGTELEAII
SSVNSISENV SVIARGAEEQ AVTLSEINSG IGHLDEVTQN NVAMVEETTG ASQTLASDAS
VMSKEIANFV SEGEIKIAKH VAPIPNTPPP TVEPELELRT GT
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