| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1485 |
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| Symbol | |
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| ID | 4077041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1586750 |
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| End bp | 1587571 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638006798 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_613480 |
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| Protein GI | 99081326 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGC CCCTTCGCAT ATTTCTGACC GGCAGTGGCG GCATCCTTGG CAGGCATGTT
TCAACCGCGC TCCTGGCTCA TGCGCCAGGC GCGCAGGTTT TGCGCAATAC TGCGGATCTC
ACGGATTTGG CCGCGACCAC GCGGGTGGTG CAGAGGGCAG GCCCGCTTGA TCTGGTGATC
CATCTCGCTG CTTTGGTTCC CGTGGACGAG GTCTGCGCTG ATCCGGCGCG CGGCTATGCT
GTCAACGCGG GCGGAACGAT CAATCTACTC GCCGCTTTGG CTGCTGCAGA AGTAGGGCAG
GCGACACCTG CGCGCCTGCT GCATTGCTCG TCCGGTCATG TCTACGCCGC CCAGGACCGC
CCCATCTCTG AGGAGGATCC AACAGATCCG GTCTCGGTCT ATGGAAAGAC CAAACTGATG
GGAGAACAGG CCGCTCGCGA CATCTGCGCC CAAGTCGGGC GCGCTCTCTG CGTGGCGCGT
CTATTCTCGA TCCATGATCC TGCGCAGGAG GGAAACTACC TGCGCCCATC ACTGGAACGT
CGCCTTGCAA AAGCCAGCCC AGAAACGGAA TTCGAACTAT ATGGTGCTGG CAGCTTGCGC
GATTTCCTCA CCGCTGAGGC GGCTGCGCAG CAGCTTGTGC GCCTGGCTAT TTCTTCCTTT
GAAGGGGTGG TGAACCTCGG TTCCGGTCGC GCCCAGACTG TCGCCGAGTT CGCCCAGAGC
TTTGCGCCTT TTCCTCTCAA AATCAAAGCC ATGGGAGCCG ATAACAATCT GGTTCCCGAC
GTCTCCCTCC TGCATGACAT CCTTGGAGAA GCAAATGACT GA
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| Protein sequence | MSQPLRIFLT GSGGILGRHV STALLAHAPG AQVLRNTADL TDLAATTRVV QRAGPLDLVI
HLAALVPVDE VCADPARGYA VNAGGTINLL AALAAAEVGQ ATPARLLHCS SGHVYAAQDR
PISEEDPTDP VSVYGKTKLM GEQAARDICA QVGRALCVAR LFSIHDPAQE GNYLRPSLER
RLAKASPETE FELYGAGSLR DFLTAEAAAQ QLVRLAISSF EGVVNLGSGR AQTVAEFAQS
FAPFPLKIKA MGADNNLVPD VSLLHDILGE AND
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