| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1482 |
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| Symbol | |
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| ID | 4077779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1583603 |
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| End bp | 1584724 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638006795 |
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| Product | GDP-mannose 4,6-dehydratase |
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| Protein accession | YP_613477 |
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| Protein GI | 99081323 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1089] GDP-D-mannose dehydratase |
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| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.246967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAAC GTGCGCTCAT CACCGGGGTC ACCGGTCAAG ACGGCTCTTA CCTGGCAGAG
TTCCTGCTGG AGAAGGGCTA TGAGGTGCAT GGCATTAAGC GCCGCGCCTC ATCCTTCAAC
ACCAGCCGTA TCGACCATAT CTATCAGGAT CCGCACACGG ATCGGGCGCG CTTCAAGCTG
CATTATGGAG ATCTGGCCGA CACTTCCAAC CTGACGCGGA TCTTGCGCGA GGTCGAACCG
GATGAGGTGT ATAACCTCGG TGCGCAATCT CATGTCGCGG TGTCTTTTGA GGCTCCGGAA
TACACGGCAG ATGTGGATGC CATTGGCACA CTGCGCCTCT TGGAGGCGAT CCGTTTCCTC
GGTCTTGAGC AGAAGACCCG GTTTTATCAG GCCTCGACAT CTGAGCTCTA TGGTCTGGTG
CAGGAGACGC CGCAACGCGA AACGACTCCG TTTCACCCCC GCTCGCCCTA TGCGGTGGCC
AAGATGTACG CCTATTGGAT CACGGTGAAC TACCGCGAGG CTTATGGCCT TTACGCTTGT
AACGGCATTC TGTTCAACCA TGAGAGCCCG CGCCGGGGTG AGACATTTGT GACCCGCAAG
ATCACCCGCG GCCTTGCCAA TATCGCACAG GGGCTCGAGC CCTGCCTTTA CATGGGCAAT
ATCGACAGCC TGCGGGATTG GGGTCATGCC AAGGACTATG TGCGCATGCA GTGGATGATG
CTGCAGCAAG ACACGCCCGA GGATTTCGTG ATCGCCACGG GCAAGCAATC TTCCGTGCGG
GAGTTCATCA TCTGGTCGGC AGCGGAACTC GGGATTGAGC TCGAGTTTTC CGGCAAGGGC
GTGGACGAGG TGGCAACTGT CACCGCGATC AACGGTGATG CCGCACCCGC GCTCAGGGTG
GGCGATATTG TCATGCGTAT TGATCCGCGG TACTTCCGTC CGGCCGAGGT CGACACGCTC
CTTGGAGATC CGACAAAGGC GAAGGAAAAA CTCGGCTGGG TGCCGGAGAT CACGGCGCAG
GAGATGTGCG CGGAAATGAT TGAGGAAGAC CTGAAAACCG CGCGCCGTCA TGCCCTTTTG
AAAGAACATG GCTATGATCT GCCGGTCTGC ATCGGGGAGT AA
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| Protein sequence | MTKRALITGV TGQDGSYLAE FLLEKGYEVH GIKRRASSFN TSRIDHIYQD PHTDRARFKL
HYGDLADTSN LTRILREVEP DEVYNLGAQS HVAVSFEAPE YTADVDAIGT LRLLEAIRFL
GLEQKTRFYQ ASTSELYGLV QETPQRETTP FHPRSPYAVA KMYAYWITVN YREAYGLYAC
NGILFNHESP RRGETFVTRK ITRGLANIAQ GLEPCLYMGN IDSLRDWGHA KDYVRMQWMM
LQQDTPEDFV IATGKQSSVR EFIIWSAAEL GIELEFSGKG VDEVATVTAI NGDAAPALRV
GDIVMRIDPR YFRPAEVDTL LGDPTKAKEK LGWVPEITAQ EMCAEMIEED LKTARRHALL
KEHGYDLPVC IGE
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