| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1477 |
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| Symbol | |
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| ID | 4077774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1577426 |
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| End bp | 1578394 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638006788 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_613472 |
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| Protein GI | 99081318 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.214116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTTT CCCGTAGAAC TCTTTTGAAA TCCGTGGGCC TTGCTGGTGC AGGTCTTGCT
GTACCTTCTC TGGGCCAGAT GGCGCTGGCC GCACCAATGG CCCCTGCGCC TGTGCTGCAT
CAGTTCCGCC TTGGCGACGC CGTGATTACC GCGCTTCTTG ATGGGCATCT GTCGCTGCCA
TCTGGTATGT TCACCGGGGC CGATCCTGAA ACCGTTGCGC AGACGCTTGC CGGGACCTTC
TACCGCGAGG ACGCGCAGGG GCTCGAGATC CCGGTCAACG GGTATCTTGT GGAGCGCGCA
GGCCAGTACA CCCTCATTGA CACCGGCACG GCTGCGCTGA TGGGGCCGGA GCTTGGCGGG
TTGATGGGGG CCCTCGCCGC GACAGGCGTG ACGCCCGATC AGATCTCCAC GATCTTGTTG
ACCCATATGC ATCCGGATCA CGCGGGTGGT CTTTTGAATG CGGACGGCAG CGCGGCCTTT
CCCAATGCAG AGTTGGTGGT GGCCGACGCC GAGTGGGGGT TCTGGCACGA CGATGCGATT
ATGGCCTCCG TCGACGAAGG CAGTCGCGGC TTCTTTCAGA TGGCCCGCAA TGCGGTAGCG
CCGTATGCGG ATCGGATGAA GCCGTTTAGT GGCGAGGCCG AGGTGGCGGC GGGCTTCAGC
GCCATGCCAT TGCCGGGACA TACGCCGGGG CACAGTGGCT TTATGCTTGA TGCAGGCTCC
GAGCAGCTCT TGTTCTGGGG CGATGTGGTT CATAGCACCG CGCTTCAGTT CCGCAATCCT
GACTGGACCA TCCCCTTTGA TGCGGATCAG TCGCTGGCGG CCCAGACCCG CAAAGCGATG
TTCGACCGCG CAGTTGCTGA TCAGTTGCTG GTGACGGGCA TGCATCTGGA TTTCCCCGGA
CTCGGACGGG TCGAACGCGA CGGCGGGGCC TACGCCTTTG ACCAGGCGCC CTGGCAATTC
GGCCTCTGA
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| Protein sequence | MTLSRRTLLK SVGLAGAGLA VPSLGQMALA APMAPAPVLH QFRLGDAVIT ALLDGHLSLP
SGMFTGADPE TVAQTLAGTF YREDAQGLEI PVNGYLVERA GQYTLIDTGT AALMGPELGG
LMGALAATGV TPDQISTILL THMHPDHAGG LLNADGSAAF PNAELVVADA EWGFWHDDAI
MASVDEGSRG FFQMARNAVA PYADRMKPFS GEAEVAAGFS AMPLPGHTPG HSGFMLDAGS
EQLLFWGDVV HSTALQFRNP DWTIPFDADQ SLAAQTRKAM FDRAVADQLL VTGMHLDFPG
LGRVERDGGA YAFDQAPWQF GL
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