Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1469 |
Symbol | |
ID | 4077766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 1570319 |
End bp | 1571401 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638006780 |
Product | radical SAM family protein |
Protein accession | YP_613464 |
Protein GI | 99081310 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1533] DNA repair photolyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.637197 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAACA CGGATCCTTT TTCGCCTCGA TGTCGCAAAG CGCGCGGTGC GCTCAGCAAT GCGGCAGGCC GGTTTGATCT GGCGCGCGAG GCGCAGGACG ATGGCTGGTG GCAGGAGGCG CCGGATCCTT CTGTTGCGAC AGAGATTCGC AACGAGCTAG CGCGCAGCCT GATCTCTTAC AACCGTTCGC CGGATCTGCC CTTTGACCGC TCGATCAACC CCTATCGCGG CTGTGAGCAA GGTTGCGTGT ATTGTTTTGC GCGCCCGTCG CATGCCTATC TCGGCCTGTC GCCGGGGCTG GATTTCGAAA CCCGGCTTGT TGCACGCAGC AACGCGGCAG AGGTGCTGCG AAAAGAGCTC TCGGCGCGGA GCTACAAGGT CGCGACCCTG GCCATCGGCA CCAACACGGA TCCCTATCAG CCCTGCGAGC GGGATCATCT CTTGATGCGC CAGTGTCTTG AGGTGCTGCA GGCGTTCAAT CACCCGGTGG CAATTGTCAC CAAGGGCACT CTGATCGAGC GCGATATTGA TATTCTGACC GATATGGCGC GCCGCGGCCT GGTGCGAGTC GGGATTTCCG TGACCACGTT GGATGCGAAC CTGTCGCGGC GGATGGAGCC GCGCGCGCCG GTGCCTGCGC GGCGCCTGGC GACGATCCGA CGGCTGAGTG CTGCGGGGGT TCCAGTACGC ATAATGACGT CGCCCTTGGT GCCGGGGCTC ACCGATCACG AGCTTGAGGC GCTATTGGCA GCCGGGCAGG ACGCGGGTGC AGATGCGGCC AGCTGGATCA TGTTGCGCCT GCCGCGCGAG GTATCGCAGC TCTGGCAGGA CTGGCTTCAA GAGCATGCAC CCGATCGGGC CGCCAAGGTG ATGGCGCGGC TGCGCGAGAT GCATGGCGGG CGCGATTACG ATCCGCGCTG GGGGCACCGG ATGCGAGGGG AGGGCGAGTA TGCCGAGATG ATCGCGCGCC GTTTTCGGCT GGCTTGCAAG CGGCTTGGAT TGGCAGAGCG CACCGCGCCC CTCAGAACAG ACCTCTTTGC AAAACCGCTG CAGCCCGGCG ATCAGCTCAG CCTGTTTTCC TGA
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Protein sequence | MQNTDPFSPR CRKARGALSN AAGRFDLARE AQDDGWWQEA PDPSVATEIR NELARSLISY NRSPDLPFDR SINPYRGCEQ GCVYCFARPS HAYLGLSPGL DFETRLVARS NAAEVLRKEL SARSYKVATL AIGTNTDPYQ PCERDHLLMR QCLEVLQAFN HPVAIVTKGT LIERDIDILT DMARRGLVRV GISVTTLDAN LSRRMEPRAP VPARRLATIR RLSAAGVPVR IMTSPLVPGL TDHELEALLA AGQDAGADAA SWIMLRLPRE VSQLWQDWLQ EHAPDRAAKV MARLREMHGG RDYDPRWGHR MRGEGEYAEM IARRFRLACK RLGLAERTAP LRTDLFAKPL QPGDQLSLFS
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