| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1462 |
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| Symbol | |
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| ID | 4077759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1562751 |
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| End bp | 1564553 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638006773 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_613457 |
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| Protein GI | 99081303 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0277816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.69414 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCCT CTGAGGAGAC TCCCGGCGCA AAGCCGCCTG CGCCTTCTGA ACGTCGTGCT
GAGCGCCCGA CGTTGAGGTC GCGCACGATC TCCTGGCGCG TGCGCCTGGC ACTTGTGGCC
TTCATGGCCA TCGCAGGGGC GACCGTCTGG TTCACCAACT CCACGTTGAC CCACAGTTTT
ACCGAGACCA CACGCAATCG GGCGGAACTG CGGCTTGCGC TTTATTCAGG CAACCTCGTC
AGCGAATTGC GCCGCCACGC GATTGTGCCG CAGCTTCTGT CGCGCGACCA GGCGCTGATC
TCGGCGCTGC AGAGCCAGGA TTTTTCGCTT TCGACCCAGC GCCTCATTTC CTTTGTTGAT
GAAATCGGTG CGGCCTCCAT AACCTTGATG GACCGAGATG GGCGCACGGT TGCGGCCACG
GATCGTGTTC GACTCGGTGA AATCTATCGC AATGCGCCCT TCTTTGTTGA GGCAATCCGG
TCGAACGCCA CCGTGTTTTC GGTGATCCCG CGCGAGGTGC GGGGGTATCA ATTCACGTAT
TCGCGCCGTC TCGTCGACAG CAGCGGCACG CTTGGCGTCA TTATGGTCGA GGTCGATCTG
CAAAAGTTCG AACGCGCCTG GGCGGGCATT TCCGACGCCG TGATGGTGGC CGACAGCACC
GGCACCGTTG TGCTCGCCAC AGAGGCGCGC TGGCGGGGGC TCTCGGAAGG GGAGGCCCTG
AAGGAGCAAA CACCGGAGGG TGCGATCCAG CGTGCCATCC GCGCGACTGC GGATTGGGCT
GCCCTGCCCA CCGATGTCTA CCTGCAAGGT GAGGCGGTGA TGCGGCTCGA GACTCGGGTG
CCGTTCCAGG GGTGGCGGAT GATGTCCTAC ACCACCTATG ATTCGATCCG CGAACAGGTC
AACGCGGTGA TTGCGCTCGA AATCATGGGG TTTGCGATCC TGCTTGCGTT GGCGTTTTAC
GCGTTGAGCC GCAAGACGGC GCTGCGGATG GCGCTGTTTC AGCGCGAGTC GGCGGAGCTT
CGCGTGTTGA ATGCGCGCCT GCAGCGGGAA ATTGCCGAGC GTGAACGGGT GCAAAAGACC
CTCGCTGTGG CTGAACAAAG CCTTGCGCAG AGCTCCAAAC TGGCCGCGCT CGGAGAGATG
TCTGCCGCCG TGAGCCATGA GCTCAACCAG CCGCTGGCGG CGATGAAAAC CTACCTCGCG
GGTGCGCGCC TGCTCCTGCA ACGTAACCGC CCCGACGAGG CGCTGTCGTC TTTTGGGCGC
ATCGACGACC TCATTGAACG CATGGGGGCG ATCACGCGGC AGCTGAAATC CTATGCGCGC
AAGGGTGGAG ACGCGTTCAG CCCAGTAAAC ATGGGCGATG CGCTCGCCTC TTCGCTGTCG
ATGATGGAGC CGCAACTGCG CCAGCGCCAC GTCCAGATCA CCCGTATCCT GCCGGATGAG
CCGGTCTTTG TGATGGCGGA TCGGATGCGA CTGGAGCAGG TTATGGTGAA CCTCTTGCGC
AATGCGCTGG ATGCCACCAA ATCTGTTGAG GAACCCGAGG TTGAGATCAT CCTGGCCGCC
GGTGAAACTG CGACCCTCAC GGTCCGCGAC AATGGCGACG GCATTCAGGA TTTCGACAGC
CTGTTCGAGC CGTTTTACAC CACCAAGCAA CCGGGTGACG GTGTCGGACT TGGGCTTGCT
ATCTCCTCGG GGATCGTGAA CGACCTAGGC GGTCGCCTCA CGGCCCGCAA TTCCGATGCG
GGCGGCGCGG TGTTTGAAAT GCAACTGCCG ATCCTGATGG ACGGCATCGA GGCCGCCGAA
TAG
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| Protein sequence | MTASEETPGA KPPAPSERRA ERPTLRSRTI SWRVRLALVA FMAIAGATVW FTNSTLTHSF
TETTRNRAEL RLALYSGNLV SELRRHAIVP QLLSRDQALI SALQSQDFSL STQRLISFVD
EIGAASITLM DRDGRTVAAT DRVRLGEIYR NAPFFVEAIR SNATVFSVIP REVRGYQFTY
SRRLVDSSGT LGVIMVEVDL QKFERAWAGI SDAVMVADST GTVVLATEAR WRGLSEGEAL
KEQTPEGAIQ RAIRATADWA ALPTDVYLQG EAVMRLETRV PFQGWRMMSY TTYDSIREQV
NAVIALEIMG FAILLALAFY ALSRKTALRM ALFQRESAEL RVLNARLQRE IAERERVQKT
LAVAEQSLAQ SSKLAALGEM SAAVSHELNQ PLAAMKTYLA GARLLLQRNR PDEALSSFGR
IDDLIERMGA ITRQLKSYAR KGGDAFSPVN MGDALASSLS MMEPQLRQRH VQITRILPDE
PVFVMADRMR LEQVMVNLLR NALDATKSVE EPEVEIILAA GETATLTVRD NGDGIQDFDS
LFEPFYTTKQ PGDGVGLGLA ISSGIVNDLG GRLTARNSDA GGAVFEMQLP ILMDGIEAAE
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