| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1457 |
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| Symbol | |
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| ID | 4077754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1555970 |
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| End bp | 1556722 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638006768 |
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| Product | cytochrome c biogenesis protein, transmembrane region |
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| Protein accession | YP_613452 |
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| Protein GI | 99081298 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0785] Cytochrome c biogenesis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00340788 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.584916 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTGGAA TCGAGATCAT AGACGCGAGC CTTCTGCCCG CCATGTTTGT TGCCCTTGTC
GGGGGCATTA TCAGCTTTCT GAGCCCCTGC GTGCTGCCGA TCGTTCCGCC CTATCTGGCG
TATATGAGCG GCGTGACGAT TGGCGAGATC CAAGGCACGG CCGCTGCTCG GCGCAAGGCC
ATCCTGGCGG CGGTATTCTT TGTGATGGGG CTGTCGACGG TTTTCCTGCT CCTGGGGTTC
ACGGCCTCCG CGTTTGGCGC ATTTGTTCTT CAAAATCAGG AGCTTTTTGC CAAAGCTTCA
GGTGTCGTCG TGATCATTTT TGGTCTGCAT TTCCTGTCGG TTTTTCGGAT TCCGATCCTG
GATCGCGAAG CGCGGATGGA AACCGGCGAG ACCGGCGGCT CGGCACTTGG GGCCTATGTG
CTTGGTCTGG CCTTTGCCTT TGGCTGGACG CCTTGCATCG GTCCGCAGCT TGGCGCGATC
CTGTCGCTTG CCGCCTCCGA GGCGTCCGTG AGCCGTGGTA CGCTCCTGTT GGGGGTTTAT
GCACTGGGGT TGGGCGTGCC GTTCCTTCTG GCAGCGATCT TCCTCAACAG ATCCATGGTG
CTGATGAACC GTATCAAACG CCACATGAGC CTCATTGAGA AACTGATGGG CGGGTTGCTT
CTGGTGGTGG GCTTCATGCT GGTCACAGGG CTTTTCACCA GCTTCTCTTT CTGGCTTCTC
GAAACCTTCC CGGCACTCGC AACTCTGGGC TAA
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| Protein sequence | MFGIEIIDAS LLPAMFVALV GGIISFLSPC VLPIVPPYLA YMSGVTIGEI QGTAAARRKA
ILAAVFFVMG LSTVFLLLGF TASAFGAFVL QNQELFAKAS GVVVIIFGLH FLSVFRIPIL
DREARMETGE TGGSALGAYV LGLAFAFGWT PCIGPQLGAI LSLAASEASV SRGTLLLGVY
ALGLGVPFLL AAIFLNRSMV LMNRIKRHMS LIEKLMGGLL LVVGFMLVTG LFTSFSFWLL
ETFPALATLG
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