| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1452 |
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| Symbol | fumC |
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| ID | 4077749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1550169 |
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| End bp | 1551566 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638006763 |
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| Product | fumarate hydratase |
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| Protein accession | YP_613447 |
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| Protein GI | 99081293 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0114] Fumarase |
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| TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.315875 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAACA CCCGCACCGA AACCGACAGC TTTGGCCCGC TTGAGGTCCC TTCCGACAAA
TACTGGGGGG CGCAGACTCA GCGTTCGATC ATGAACTTTC CCATTGGCTG GGAAAAACAG
CCTGTCGCCA TCGTGCGCGC GCTTGGCGTG ATCAAGAAGG CCTGCGCCAT GGCCAACAAA
GCTTCGGGCA AGCTGGACGC CAAGATCGCA GATGCGGTGA TCCAGGCCGC AGGCGAAGTG
GTTGAGGGCA AGTTCGACGA CAACTTCCCG CTCGTGGTCT GGCAGACCGG GTCCGGCACC
CAGTCCAACA TGAACTCCAA CGAGGTGATC GCCAACCGCG CGATCGAGAT CCTCGGCGGC
GTCATTGGCT CCAAAGATCC AGTCCACCCG AACGATCACT GCAACATGGG GCAGTCCTCC
AACGACACGT TCCCGACTGC CATGCATATC GCCACCGCAA TGTCCGTGCG CGACGTGTTG
GTGCCGGGCC TCACGAAACT GGCCGAGGGG CTGGAAGCCA AGGCCGAGGA ATTCAAAGAC
ATCATCAAGA TCGGCCGCAC CCACACGCAG GATGCAACGC CGCTCACACT GGGTCAGGAA
TTCGGCGGCT ACGCGCATCA GATCCGTCAG GGTCTGGCCC GGGTTGAGGC TGCAATGCCC
GGCATCTACG AGCTGGCACA GGGCGGCACC GCAGTTGGCA CCGGTCTCAA TACCGTAGAA
GGCTGGGGCG AGGAAGTCGC TGCAAACATG GCAGAAATCA CCGGTTTGCC GTTTGTGACC
GCGCCCAACA AGTTCGAAGC CCTCGCAGCG CATGACGCGA TGGTTTTCCT CTCTGGCGCG
CTCGCGACCA TCGCTGGCAG CTGCTACAAG ATCGCCAACG ACATTCGGTT CCTCGGCTCT
GGCCCGCGCT CCGGTCTGGG CGAGCTGATC CTGCCAGAGA ACGAACCCGG CTCTTCGATC
ATGCCGGGCA AAGTGAACCC GACCCAGGCC GAGGCGCTCA CTCAGGTGGC AGCACATGTC
ATGGGCAATG ACGCCGCGAT CAAATTTGCG GGCTCTCAGG GTCACTTTGA ACTGAACGTC
TACAACCCGA TGATGTCCTA TAACCTCTTG CAGTCCATCC AGCTCCTCGG CGACGCGGCC
GACAGCTTTA CCGAGCGGAT GCTGAGCGGC ATTCAGGCCA ACGAGCCGCG CATCGACAAG
CTGATGAAAG AAAGCCTGAT GCTGGTGACC GCGCTGGCAC CGACCATCGG CTACGACAAC
GCCACCACGG TCGCCAAGAC CGCGCATAAA AACGGCACCA CCCTCAAGGA AGAGGCGATC
AAACTCGGCT TTGTGGACGA AGAGACCTTT GACAAGGTTG TCCGCCCCGA GCAGATGATC
GGCCCCAAGG CGAAGTGA
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| Protein sequence | MSNTRTETDS FGPLEVPSDK YWGAQTQRSI MNFPIGWEKQ PVAIVRALGV IKKACAMANK
ASGKLDAKIA DAVIQAAGEV VEGKFDDNFP LVVWQTGSGT QSNMNSNEVI ANRAIEILGG
VIGSKDPVHP NDHCNMGQSS NDTFPTAMHI ATAMSVRDVL VPGLTKLAEG LEAKAEEFKD
IIKIGRTHTQ DATPLTLGQE FGGYAHQIRQ GLARVEAAMP GIYELAQGGT AVGTGLNTVE
GWGEEVAANM AEITGLPFVT APNKFEALAA HDAMVFLSGA LATIAGSCYK IANDIRFLGS
GPRSGLGELI LPENEPGSSI MPGKVNPTQA EALTQVAAHV MGNDAAIKFA GSQGHFELNV
YNPMMSYNLL QSIQLLGDAA DSFTERMLSG IQANEPRIDK LMKESLMLVT ALAPTIGYDN
ATTVAKTAHK NGTTLKEEAI KLGFVDEETF DKVVRPEQMI GPKAK
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