Gene TM1040_1449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1449 
Symbol 
ID4077746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1547314 
End bp1548600 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content60% 
IMG OID638006760 
Productchromate transporter 
Protein accessionYP_613444 
Protein GI99081290 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2059] Chromate transport protein ChrA 
TIGRFAM ID[TIGR00937] chromate transporter, chromate ion transporter (CHR) family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.474038 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACTC CCCTCGCCTC GCAGACCCCG CCCCCCTCGT GGTGGGCGCT GTTTCACTGT 
TTTGGAATGA TCGGCCTTCT GAGTTTTGGC GGACCCGCCG CGCAGATTGC GCTGATGCAC
CGTGAACTCG TGGATCGCCG CGATTGGCTT GAGGAAGAAG CGTTTTTAAG AGGGCTGTCG
TTTTGCATGC TGCTGCCGGG GCCCGAAGCG ATGCAGCTGG CGACCTACAC GGGCTGGCGC
ATGCGTGGCG TTGGCGGAGG TCTCTTGGCG GGCAGCCTGT TCATCATCCC CGGCGCGCTG
GTGATTGCAG CGCTGGTCTT TCTCTACGTA AGCTTCGGCA CCCTCCCCGC GGTGAAATCC
GCATTTCTCG GCATCAAGGC TGCGGTGGTG GTGATCGTCA TTCAGGCCCT CTGGCGGATC
TCGCAAAAAG CGCTCAAGAC CGCCGGTGCC TGGGCGCTTG CACTTGGTGG ATTTGTGGCG
CTCTTTGTCT TTGACCTCCC CTTTCCTTTG GTGGTGCTTC TCGCCGGGGG AATTGGTCTC
CTTCAACGCG CGCCATCCAC CGATCCCCTG CCTTCGGCGC ATCATGTCCC GGCGCATCAT
GGGCGCACCA TCCTGTTTTG GACGGCGCTC TGGCTTCTGC CCCTTCTCGG CCTCAGTCTG
ATCGGGGCGG AGTTTCTCGC CACAATTGGA TGGTTTTTTG CAAAACTGGC GGTTGTGACC
TTTGGCGGCG CATATGCTGT ACTGGCGTAT ATGACCCAGA CTGTCGTCAG CGATCATGGC
TGGATCACCA CGGGACAGAT GATCGACGCA TTGGGTCTTG CGGAGACCAC GCCCGGGCCG
CTTGTGCTTG TGACGCAGTT TGTGGCCATG CTTGCCGGTT CCGAAATGGG CGGCACAAAA
CTCGCGATTG CCGCCGGAGC AGTTGCGCTT TGGGCGACCT TTGTGCCCTG TTTTCTCTGG
ATTTTTGCTA CCGCTCCCTA TGTCGAACGA CTGACGGCCC ACCCGCGCCT GCGCAGTGCT
CTGGCGGCAA TCACGGCAAG CGTAGCGGGG ATGATGCTCA ATCTCTCTGT TTGGTTTTTG
CTGCATCTGC TGTTTCAGAC CAACACCCAT CGAGATCTTG GGCCGATCTC GGTACCTCTG
CCCGAGTTTG GCAGCCTCGA CCAGACTGCG CTGATCCTGA CCGCTCTGGC GCCAGTCGTG
GCTGCTCTCT TGCGCGGGCG GATCCTTTGG CTCCTTGCAA CCATGGCGTG CTTTGGACTT
GTTGTTGCAG GCTTCACGGT CGGCTAA
 
Protein sequence
MTTPLASQTP PPSWWALFHC FGMIGLLSFG GPAAQIALMH RELVDRRDWL EEEAFLRGLS 
FCMLLPGPEA MQLATYTGWR MRGVGGGLLA GSLFIIPGAL VIAALVFLYV SFGTLPAVKS
AFLGIKAAVV VIVIQALWRI SQKALKTAGA WALALGGFVA LFVFDLPFPL VVLLAGGIGL
LQRAPSTDPL PSAHHVPAHH GRTILFWTAL WLLPLLGLSL IGAEFLATIG WFFAKLAVVT
FGGAYAVLAY MTQTVVSDHG WITTGQMIDA LGLAETTPGP LVLVTQFVAM LAGSEMGGTK
LAIAAGAVAL WATFVPCFLW IFATAPYVER LTAHPRLRSA LAAITASVAG MMLNLSVWFL
LHLLFQTNTH RDLGPISVPL PEFGSLDQTA LILTALAPVV AALLRGRILW LLATMACFGL
VVAGFTVG