| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1443 |
|---|
| Symbol | |
|---|
| ID | 4078073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 1541561 |
|---|
| End bp | 1542556 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638006754 |
|---|
| Product | zinc-binding alcohol dehydrogenase |
|---|
| Protein accession | YP_613438 |
|---|
| Protein GI | 99081284 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR02823] putative quinone oxidoreductase, YhdH/YhfP family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.109309 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.103295 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAAG CCCTTGTTAT GACGCAAGAC AGCGAGAGCG GCAAAGCCGC TGCTGAAATT
CAGGATCTGA CCCTTGAGGA TCTGCCGGAA GGAGAGGTCA CGGTCGCCGT CTACTATTCC
ACCGTGAACT ACAAGGATGG CCTGTGTCTC AGCCCCAAGG GCGGCGGATT GGTGCGCAAT
TATCCGCATG TGCCGGGGAT CGATTTTGCC GGCACCGTCG AGAGCTCCTC TGATGAGCGC
TACGCCCCGG GCGATAAGGT GGTCCTGACC GGCTGGCGCG TGGGCGAAGC CCATTGGGGC
GGCTATGCAC AAAAGGCCCG TGTCAAGGCG GATTGGCTGG TGCCGCTGCC CGAAGGGATC
ACGCCCCGTC AGGCGATGGC CGTGGGCACT GCAGGCTTTA CTGCGATGCT GGCGGTGATG
GCGCTGGAGG ATCACGGGCT GAAACCCGGA ACGGGACCGG TTCTGGTCAC AGGCGCGGCC
GGGGGCGTTG GCTCCGTGGC GACGGCGATC CTCGCCAACC TCGGTTACGA GGTGGCTGCC
GTTACCGGGC GTCCCGAGAC AGCCGACTAC CTCCAGAGCC TCGGCGCAAC CCAGATCGTG
CCCCGCGAGG ATCTGAACGA GACCGTAAAA CGCCCGCTCG AAAGCGAGAC CTGGGCAGGC
TGTGTCGACG CGGTCGGGGG GGATATGCTG GCGCGCGTGC TCGGGCAGAT GAAATACGGT
GCCTCGGTTG CGGCCGTGGG GCTTGCGGGC GGTGCGGCTC TGCCGGCCAC TGTGATTCCC
TTCCTTCTGC GTGGTGTGAA CCTCCTCGGC ATCGATTCCG TGATGCAGCC CTTTGAGAAC
CGCCAGCGCG CTTGGCAGCG AATTGCCAGC GATCTGCCGC TCGAAAAGCT CGACGCCATG
ATCCAGCCCG CATCACTGAC CGACCTGCCA AAACTCGGCG CCGATATTCT GGCCGGGCAG
GTGAAGGGGC GCGTCGTCGT CGACGTCAAC GCCTGA
|
|---|
| Protein sequence | MFKALVMTQD SESGKAAAEI QDLTLEDLPE GEVTVAVYYS TVNYKDGLCL SPKGGGLVRN
YPHVPGIDFA GTVESSSDER YAPGDKVVLT GWRVGEAHWG GYAQKARVKA DWLVPLPEGI
TPRQAMAVGT AGFTAMLAVM ALEDHGLKPG TGPVLVTGAA GGVGSVATAI LANLGYEVAA
VTGRPETADY LQSLGATQIV PREDLNETVK RPLESETWAG CVDAVGGDML ARVLGQMKYG
ASVAAVGLAG GAALPATVIP FLLRGVNLLG IDSVMQPFEN RQRAWQRIAS DLPLEKLDAM
IQPASLTDLP KLGADILAGQ VKGRVVVDVN A
|
|---|
| |