| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1432 |
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| Symbol | aroB |
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| ID | 4078062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1529139 |
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| End bp | 1530260 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638006742 |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | YP_613427 |
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| Protein GI | 99081273 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0337] 3-dehydroquinate synthetase |
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| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.68619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.103295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAAA CCGTTCACGT TCCCCTTGGC GCGCGCGCCT ATGATGTGGT GATCGGCCCC
GATCTTGTTG CACAGGCGGG CCAGCGTATT GCGCCCCTCC TGCGCCGCAA GACAGTGGCT
GTGCTCACGG ATGAGACCGT GGCCGCGCTT CATCTTGAGG CTCTGCGCGC GGGACTCGCA
GCCGACGGCA TCGAGATGGA AGCACTTGCC TTGCCGCCCG GCGAGGCCAC TAAAGGCTGG
CCCCAGTTCA CCCGCGCGGT GGAGTGGCTC TTGGACAAGA AAGTCGAGCG CGGCGACATC
GTCATTGCCT TTGGCGGGGG CGTCATCGGC GATCTGGCGG GTTTTGCCGC AGCCGTGCTG
CGCCGGGGCG TTCGTTTTGT CCAGATCCCC ACATCCCTGC TGGCGCAGGT CGACAGTTCC
GTCGGGGGCA AAACCGGCAT CAACGCTCCG CAAGGCAAGA ACCTGATCGG CGCCTTCCAC
CAGCCCAGCC TGGTACTGGC CGATACAGCG GTTCTTGGCA CGCTCACAGA GCGCGATTTT
CTTGCCGGCT ACGGTGAGGT GGTGAAATAC GGGCTCTTGG GCGATGCGGC CTTTTTTGAC
TGGCTCGAAG AAAATGCCCC GGCAATGGCG GCAGGTGACA TGGCGCTGCG GGTCGAAGCC
GTGGCGCGTT CGGTTCAGAT GAAAGCCGAC ATCGTGGCCC GCGACGAAAC CGAACAAGGC
GACCGGGCGC TGTTGAACCT TGGTCATACC TTCTGTCACG CGCTGGAAGC GGCGACCGGC
TACAGCGACC GGTTGCTGCA TGGCGAAGGC GTGGCGATCG GCTGTGCGTT GGCCTTTGAG
CTCTCAGCCC GCCTCGGCCT CTGCAGTCAG GAAGATCCCA GCCGCGTGCG CGCGCACCTC
AAGGCGATGG GCATGAAAAC AGACCTCTCG GACATTCCCG GCGATCTTCC CCCCGCCCAA
GAGCTTCTGG ATCTCATGGC GCAGGACAAG AAGGTCGTGG ATGGTCAGCT GCGCTTCATC
CTCGCGCGCG GCATCGGAGC GGCCTTTGTC ACCGCCGATG TGCCCTCTGA AAAGGTGCTT
GAGGTGCTGC AAGAGGCGCT GGCGCATACA CAACCCGCCT GA
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| Protein sequence | MEQTVHVPLG ARAYDVVIGP DLVAQAGQRI APLLRRKTVA VLTDETVAAL HLEALRAGLA
ADGIEMEALA LPPGEATKGW PQFTRAVEWL LDKKVERGDI VIAFGGGVIG DLAGFAAAVL
RRGVRFVQIP TSLLAQVDSS VGGKTGINAP QGKNLIGAFH QPSLVLADTA VLGTLTERDF
LAGYGEVVKY GLLGDAAFFD WLEENAPAMA AGDMALRVEA VARSVQMKAD IVARDETEQG
DRALLNLGHT FCHALEAATG YSDRLLHGEG VAIGCALAFE LSARLGLCSQ EDPSRVRAHL
KAMGMKTDLS DIPGDLPPAQ ELLDLMAQDK KVVDGQLRFI LARGIGAAFV TADVPSEKVL
EVLQEALAHT QPA
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