| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1426 |
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| Symbol | |
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| ID | 4078056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1521820 |
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| End bp | 1524237 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006736 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_613421 |
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| Protein GI | 99081267 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0785769 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCA CCACGCGTGT GGCGATTATC GGCGGTGGCG TTGTTGGCTG TTCCGTCCTC
TATCATCTGA CAAAACTTGG CTGGTCCGAT GTGATGCTGA TCGAGCGGTC CGAGCTTACC
TCGGGCTCGA CCTGGCACGC CGCCGGTGGC TTTCACACGC TCAACGGCGA CACCAATATG
GCGGCGCTTC AGGGCTATAC CATCAAGCTC TACAAAGAGC TCGAGGCCAT CACCGGCATG
TCGTGCGGCC TGCACCATGT GGGCGGCGTG ACCCTTGCGG AGACGCAAGA GCGATTTGAC
ATGTTGAAGG CAGAACGTGC CAAACATCGC TTTATGGGAC TTGAGACAGA GATCGTAAGC
CCCGAAGAAA TCAAGAAAAT CGCGCCTGTC ACGAATATTG ATGGGATCAT TGGCGGCCTC
TATGATCCGC TCGACGGCCA CCTGGACCCC TCCGGTACCA CGCATGCCTA TGCCAAGGCC
GCGCGGTTGG GCGGCGCCAC GATCGAGACC CATTGCAAGG TGATCGAGAC CAATCAACGC
CCTGACGGAA GCTGGGACGT GGTCACGGAA AAAGGCACCA TCCACGCCGA GCACATCGTC
AATGCAGGTG GGCTCTGGGC GCGCGAAGTG GGGGCAATGG CGGGCATCTA TTTTCCGCTG
CACCCGATGG AGCACCAGTA TATCGTCACC GACGAGGTGC CGCTTATCAA GGAGATCGTT
GAGGCGGGCG GCGAGCATCC GCATGTGATG GATCCCGCTG GTGAAAGCTA TCTGCGTCAA
GAGGGTCGCG GGCTCTGTAT CGGTTTCTAT GAACAACCCT GCCGGCCGTG GGCGGTTGAC
GGAACCCCGT GGAACTTTGG TCATGAACTC CTGCCGGATG ACTTCGACAA GATCGAAGAC
AGTATTGATT TTGCGTATAA ACGTTTCCCA GCGCTGGCCG AGGCTGGGGT GAAGTCCGTG
ATCCACGGCC CCTTTACCTT TGCGCCAGAT GGCAATCCTC TGGTGGGGCC GGTTCCGGGC
GTGCGCAATT ACTGGTCGGC CTGCGCCGTG ATGGCCGGGT TCAGCCAGGG CGGCGGTGTC
GGGTTGATGC TTGCGCAATG GATGGTCGAT GGCGAGTGCG AACGCGACAC CGCAGCCATG
GATGTGGCGC GCTATGGCGA TTGGATCACC CCCGGCTACA CGCGCCCCAA AGTGGTCGAG
AACTATCAGA AACGCTTCTC GATTTCTTAT CCGAACGAAG AACTGCCTGC CGCGCGCCCC
TTCCGCACAA CGCCAATGTA CGACATCTTT GATGAGATGG GCGCTGTCTG GGGGCACCAA
TATGGCATGG AGGTGCCCAA CTATTTTGCC GCCGAGGGCG AGGCGCGGTT CGAAACGCCC
TCCTTCCGCC GCTCCAACGC CTTTGAGGCC ACCGCCCGCG AGGTGAAAGC CGTGCGAGAA
GGCATTGGAA TCAATGAGAT TCACAACTTT GGCAAATATC GCATCACAGG CAGCGGTGCG
CGCGCCTGGC TCGATCGCAT CATGGCGGGC CGCGTGCCGC AACAGGGCCG TCTGAGCCTC
ACGCCGATGC TCTCACCCAA GGGACGCCTG ATCGGGGATT TCACGATTTC CTGCCTCTCG
GAGGGGGAGT TCCAGTTGAC GGCGTCATAC GGTGCGCAGG CCTATCACAT GCGCTGGTTC
CTGCAAAATC TCGATGCGAA TGTTTCCATC GAGAATGTGT CGGATCAAGT GAATGGCTTT
CAGATCGCAG GGCCAAAGGC GGCAGCGGTG CTGCAGGCCT GCACGCGGAC CGATATCTCC
GACATGCGCT TTCTAGATGT GCGTCGCCTG ACGGTCGGGA TGGTGGACTG CGTGGTGCAG
CGGGTCAGCT ACACGGGTGA TCTTGGGTAT GAAATTTACT GCGACCTGCC GAGCCAGCGT
GCACTCTGGA CGACCCTCTG GTGTGAAGGT CAGGGCCACG GGATGAAGCC CTTTGGCATG
CGGGCCATGA TGTCTTTGCG CTTGGACAAG TTCTTTGGAT CTTGGCTGTC GGAGTTTTCG
CCGGATTACA CGGCGGCAGA GACCGGTCTC GATCGCTTTA TCTCCTTCAA GAAACCCGTT
GAATTTATTG GGAGATCCGC TGCCGAAGCC GAGCGGGAAA CCGGGGCGGA GCGAAAGCTC
TGCGCGTTTG AGGTCGACGC CGAAGACGCC GATGTGGTTG CCTATGAGCC GATCTGGCTC
GATGGAGACG TCGTGGGGTT CTGCACCTCA GGTGGTTACA GCCATTTTGC GCAGAAATCC
ATCGCGCTTG GTTTTGTTCC GGTTGAGCGC GCAACAGAAG GTCTCGAGGT GGAGATCGAG
ATCCTCGGCA AGAAACAGCG CGCGCGGTTG ATCACCGAGC CCCTGTTCGA CGCGGATGGC
GCCCGTATGC GCGGCTAA
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| Protein sequence | MKTTTRVAII GGGVVGCSVL YHLTKLGWSD VMLIERSELT SGSTWHAAGG FHTLNGDTNM
AALQGYTIKL YKELEAITGM SCGLHHVGGV TLAETQERFD MLKAERAKHR FMGLETEIVS
PEEIKKIAPV TNIDGIIGGL YDPLDGHLDP SGTTHAYAKA ARLGGATIET HCKVIETNQR
PDGSWDVVTE KGTIHAEHIV NAGGLWAREV GAMAGIYFPL HPMEHQYIVT DEVPLIKEIV
EAGGEHPHVM DPAGESYLRQ EGRGLCIGFY EQPCRPWAVD GTPWNFGHEL LPDDFDKIED
SIDFAYKRFP ALAEAGVKSV IHGPFTFAPD GNPLVGPVPG VRNYWSACAV MAGFSQGGGV
GLMLAQWMVD GECERDTAAM DVARYGDWIT PGYTRPKVVE NYQKRFSISY PNEELPAARP
FRTTPMYDIF DEMGAVWGHQ YGMEVPNYFA AEGEARFETP SFRRSNAFEA TAREVKAVRE
GIGINEIHNF GKYRITGSGA RAWLDRIMAG RVPQQGRLSL TPMLSPKGRL IGDFTISCLS
EGEFQLTASY GAQAYHMRWF LQNLDANVSI ENVSDQVNGF QIAGPKAAAV LQACTRTDIS
DMRFLDVRRL TVGMVDCVVQ RVSYTGDLGY EIYCDLPSQR ALWTTLWCEG QGHGMKPFGM
RAMMSLRLDK FFGSWLSEFS PDYTAAETGL DRFISFKKPV EFIGRSAAEA ERETGAERKL
CAFEVDAEDA DVVAYEPIWL DGDVVGFCTS GGYSHFAQKS IALGFVPVER ATEGLEVEIE
ILGKKQRARL ITEPLFDADG ARMRG
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