Gene TM1040_1404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1404 
Symbol 
ID4075897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1497608 
End bp1498393 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content63% 
IMG OID638006714 
ProductUDP-N-acetylglucosamine acyltransferase 
Protein accessionYP_613399 
Protein GI99081245 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1043] Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase 
TIGRFAM ID[TIGR01852] acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.203818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.250233 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGA TTCACCCCAG CGCCATTATC GAGGATGGCG CCAAAATCGG CGAAGGCTGC 
GAAATCGGCC CCTTTTGCAT CGTCGGCGCT GAGGTGGTGT TGGGCGACCG CGTGGTGCTG
AAGTCCCATG TGGTCGTGAC CGGCGACACG GAGATCGGCG ATGACACGGT TGTGTTTTCC
TTCTCTGTGC TGGGCGAGAT CCCGCAGGAT CTGAAGTTCA AGGGCGAGAA GTGCCGCACC
GTGATTGGCA AGCGCAACCG CATCCGCGAG CACGTGACCG TGAACGCGGG CACCGAAGGC
GGCGGCGGCG TGACCCGGAT CGGGGATGAC GGGCTGTTCA TGGCTGGCTG CCACATCGCC
CATGACGCGC AGGTGGGCGA CCGTGTGATC GTGGTGAATT CTGCCGCAAT TGCAGGGCAT
TGTGTGCTTG AGGATGACGT GATCATCGGC GGGCTGTCGG GCATCCATCA ATGGGTGCGC
ATCGGCCGCG GCGCAATCAT CGGCGCTGTC ACCATGGTGA CGAATGACGT TATTCCCTAC
GGTCTCGTGC AGGCCTCGCG CGGCGAATTG GATGGGCTCA ATCTTGTGGG CCTGAAACGG
CGCGGTGTGA GTCGCGCGGA CATCACCGCC CTTCGTGCAG CCTTTCAGAT GCTGGCGCAG
GGCGAGGGGA CGTTCTCCGA ACGCGCCCGC CGCTTGGGCG ATGAAAACGA CAGCGAATAT
GTGCAGGAAA TCGTGGCCTT TATCACCGGT CAGAGCGACC GCCACTTCCT GACTCCCGGC
GGCTGA
 
Protein sequence
MSTIHPSAII EDGAKIGEGC EIGPFCIVGA EVVLGDRVVL KSHVVVTGDT EIGDDTVVFS 
FSVLGEIPQD LKFKGEKCRT VIGKRNRIRE HVTVNAGTEG GGGVTRIGDD GLFMAGCHIA
HDAQVGDRVI VVNSAAIAGH CVLEDDVIIG GLSGIHQWVR IGRGAIIGAV TMVTNDVIPY
GLVQASRGEL DGLNLVGLKR RGVSRADITA LRAAFQMLAQ GEGTFSERAR RLGDENDSEY
VQEIVAFITG QSDRHFLTPG G