Gene TM1040_1400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1400 
Symbol 
ID4075893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1493993 
End bp1494271 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content56% 
IMG OID638006710 
Producthypothetical protein 
Protein accessionYP_613395 
Protein GI99081241 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.212063 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTTAA AGAAAGTTGA TGGCCCCCGT GCGGTCACTC TGCCGGACGG AACAGTCATG 
ACTCGGGCGG ATTTGCCGCC TCAGACCACG AAACGCTGGG TTGCCTCGCG CAAGGCGGCC
GTTGTGCGCG GAGTTTTGTA CGGATTGATT CCCCAGACCG AGGCATTGCG CCTCTACAAC
CTCAGTGAAG AGGAGTTCAG AAGCTGGGTT GCCGCCGTTG CTGATCATGG CGAAGACGCA
TTGAAAACCA CGCGCCTAAA GGATTTCCGT AATCCTTAA
 
Protein sequence
MFLKKVDGPR AVTLPDGTVM TRADLPPQTT KRWVASRKAA VVRGVLYGLI PQTEALRLYN 
LSEEEFRSWV AAVADHGEDA LKTTRLKDFR NP