Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1394 |
Symbol | |
ID | 4075887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 1487246 |
End bp | 1487635 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 638006704 |
Product | phosphoribosyl-AMP cyclohydrolase |
Protein accession | YP_613389 |
Protein GI | 99081235 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0139] Phosphoribosyl-AMP cyclohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAAGG TTTTTAACAT GCACGATTTG GTGAAGTTCT CGCCCGAGAC GCTCAAATAC AACGAAGCTG GCCTTGTGCC CTGTATTGCT CAGGATGTGG AAAGCGGCGA GATTCTGATG ATGGCCTGGA TGAACGCGGA GAGCGTCGCC AAAACGCTCG AGACCGGGCG GGTGACCTAT TGGTCGCGCT CGCGCCAGTC GTTCTGGATC AAGGGGGAGA GTTCGGGCCA TGTGCAGGAA CTGGTCGAAC TGCGCGTCGA TTGCGACCGT GATGCGCTTT TGGCAATGGT GCGTCAGACC GGGCCTGCTT GCCACACCAA TCGCCGCAGC TGTTTCTACA CGGCTATTCG GGATGGCGAA GAGCATGAGA TCATGACGCC AATATCCTGA
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Protein sequence | MQKVFNMHDL VKFSPETLKY NEAGLVPCIA QDVESGEILM MAWMNAESVA KTLETGRVTY WSRSRQSFWI KGESSGHVQE LVELRVDCDR DALLAMVRQT GPACHTNRRS CFYTAIRDGE EHEIMTPIS
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