Gene TM1040_1394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1394 
Symbol 
ID4075887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1487246 
End bp1487635 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content56% 
IMG OID638006704 
Productphosphoribosyl-AMP cyclohydrolase 
Protein accessionYP_613389 
Protein GI99081235 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0139] Phosphoribosyl-AMP cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAGG TTTTTAACAT GCACGATTTG GTGAAGTTCT CGCCCGAGAC GCTCAAATAC 
AACGAAGCTG GCCTTGTGCC CTGTATTGCT CAGGATGTGG AAAGCGGCGA GATTCTGATG
ATGGCCTGGA TGAACGCGGA GAGCGTCGCC AAAACGCTCG AGACCGGGCG GGTGACCTAT
TGGTCGCGCT CGCGCCAGTC GTTCTGGATC AAGGGGGAGA GTTCGGGCCA TGTGCAGGAA
CTGGTCGAAC TGCGCGTCGA TTGCGACCGT GATGCGCTTT TGGCAATGGT GCGTCAGACC
GGGCCTGCTT GCCACACCAA TCGCCGCAGC TGTTTCTACA CGGCTATTCG GGATGGCGAA
GAGCATGAGA TCATGACGCC AATATCCTGA
 
Protein sequence
MQKVFNMHDL VKFSPETLKY NEAGLVPCIA QDVESGEILM MAWMNAESVA KTLETGRVTY 
WSRSRQSFWI KGESSGHVQE LVELRVDCDR DALLAMVRQT GPACHTNRRS CFYTAIRDGE
EHEIMTPIS