| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1388 |
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| Symbol | |
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| ID | 4075881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1482166 |
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| End bp | 1482672 |
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| Gene Length | 507 bp |
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| Protein Length | 168 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638006698 |
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| Product | S-adenosylmethionine decarboxylase related |
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| Protein accession | YP_613383 |
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| Protein GI | 99081229 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1586] S-adenosylmethionine decarboxylase |
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| TIGRFAM ID | [TIGR03330] S-adenosylmethionine decarboxylase proenzyme, Bacillus form |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGACG CCAACCTCTT CCAACTGGGG ATCGGTCTGG AGACAGGCGC CCATGAGGAA
GATACCGCCC GCGGTGTACC CACCGCTATT GTTAACTCTT TGGTCGAAGC CGACCGGGAG
GATCACTTTA TCCGTCGCGA CGGCAAGGTC TTTGCCGGGA CCCATCTGAT CATCGAAGTG
ATGAAAGGCT CCGGACTGGA TTGTCAGGCC CGGATCGAAG ACGCGTTTCG CAAGATGGTC
GAGGTCTGCG GCGCAACCCT GCTGCATATC CATACCCATA AATTCTCGCC TCAGGGTGTG
TCGGGTGTGG CCGTGCTCGC CGAGAGCCAC ATCTCTGTGC ACACCTGGCC CGAGATCGGC
TACGGCGCAT TTGACGTCTT CATGTGTGGC GATGCACAGC CTTGGAAAGC CGTCGATGTG
CTAAAAGCCG CCTTTGAGAC CGATGTGGTA GAAGTGCGCG AATTGCTGCG CGGCGAGGAA
ATCGTCGCCA AGGAGATCGC AGCATGA
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| Protein sequence | MSDANLFQLG IGLETGAHEE DTARGVPTAI VNSLVEADRE DHFIRRDGKV FAGTHLIIEV
MKGSGLDCQA RIEDAFRKMV EVCGATLLHI HTHKFSPQGV SGVAVLAESH ISVHTWPEIG
YGAFDVFMCG DAQPWKAVDV LKAAFETDVV EVRELLRGEE IVAKEIAA
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